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DESCRIPTION
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DESCRIPTION
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Package: incidence
Type: Package
Title: Compute, Handle, Plot and Model Incidence of Dated Events
Version: 1.7.5
Authors@R: c(
person("Thibaut", "Jombart", role = c("aut"), email = "[email protected]"),
person("Zhian N.", "Kamvar", role = "aut", email = "[email protected]",
comment = c(ORCID = "0000-0003-1458-7108")),
person("Rich", "FitzJohn", role = "aut", email = "[email protected]"),
person("Tim", "Taylor", role = "cre", email = "[email protected]",
comment = c(ORCID = "0000-0002-8587-7113")),
person("Jun", "Cai", role = "ctb", email = "[email protected]",
comment = c(ORCID = "0000-0001-9495-1226")),
person("Sangeeta", "Bhatia", role = "ctb", email = "[email protected]"),
person("Jakob", "Schumacher", role = "ctb"),
person("Juliet R.C.", "Pulliam", role = "ctb", email = "[email protected]",
comment = c(ORCID = "0000-0003-3314-8223"))
)
Description: Provides functions and classes to compute, handle and visualise
incidence from dated events for a defined time interval. Dates can be provided
in various standard formats. The class 'incidence' is used to store computed
incidence and can be easily manipulated, subsetted, and plotted. In addition,
log-linear models can be fitted to 'incidence' objects using 'fit'. This
package is part of the RECON (<https://www.repidemicsconsortium.org/>) toolkit
for outbreak analysis.
Encoding: UTF-8
License: MIT + file LICENSE
URL: https://www.repidemicsconsortium.org/incidence/
BugReports: https://github.com/reconhub/incidence/issues
RoxygenNote: 7.3.1
Imports:
ggplot2 (>= 3.3.2),
aweek (>= 0.2.0)
Suggests:
magrittr,
outbreaks,
testthat,
vdiffr,
knitr,
rmarkdown,
scales,
cowplot
VignetteBuilder: knitr
Roxygen: list(markdown = TRUE)