git-prune

#!/bin/bash
set -o errexit

# Author: David Underhill
# Script to permanently delete files/folders from your git repository.  To use
# it, cd to your repository's root and then run the script with a list of paths
# you want to delete, e.g., git-delete-history path1 path2

if [ $# -eq 0 ]; then
    exit 0
fi

# make sure we're at the root of git repo
if [ ! -d .git ]; then
    echo "Error: must run this script from the root of a git repository"
    exit 1
fi

# remove all paths passed as arguments from the history of the repo
for file in "$@"; do
    files="$files '$file'"
done
git filter-branch --tag-name-filter cat --index-filter "git rm -rf --cached --ignore-unmatch $files" HEAD

# remove the temporary history git-filter-branch otherwise leaves behind for a long time
rm -rf .git/refs/original/ && git reflog expire --expire=now --all && git gc --prune=now && git gc --aggressive --prune=now