BartomeusEtal2013EcoLett: rgbif, in acknowledgements
McGeeEtal2015Science: rfishbase, in supplement
Serfass&Sherman2015PLOSOne.pdf: gender
RothmanEtal2015Circulation.pdf: plotly
Cimiano2015Proposal.pdf: "ropensci"
Crouzier2015EuropeanCommission.pdf: "ropensci"
VandepitteEtal2015JMarSciEng.pdf: "taxize" (ineferred, they cited ropensci website, but were talking about clients with access to worms aphia IDs)
Bevan2015Antiquity.pdf: "ropensci"
SchaeferEtal2016TransAmerFishSoc.pdf: rfishbase
Birch&Graham2015Bioscience.pdf: neotoma
Zizka&Antonelli2015Biorxiv.pdf: rgbif
Westcott&Schloss2015Peerj.pdf: rentrez
Mclean2015arxiv.pdf: rentrez
MackinnonEtal2016MolBiolEvol.pdf: rsnps
Marwick2016JArchMethodTheory.pdf: ropensci (https://github.com/benmarwick/basic_computational_reproducibility_case_study)
Gewin2016Nature.pdf: ropensci (karthik quote)
Perez-LuqueEtal2016Zookeys.pdf: taxize
RobertsonEtal2016Ecography.pdf: rgbif
Salguero-GomezEtal2016JAnimEcology.pdf: taxize
PlankEtal2016BullMathBiol.pdf: rfishbase
Dallas2016Ecography.pdf: helminthR, ropensci
Colomb&Brembs2016_peerj_preprint.pdf: rfigshare
(no pdf, it's a book): Wegmann, Martin, Benjamin Leutner, and Stefan Dech, eds. Remote sensing and GIS for ecologists: using open source software. Pelagic Publishing Ltd, 2016. - mentions many of our pkgs: rgbif, spocc, etc. https://books.google.com/books?hl=en&lr=&id=rCCUCwAAQBAJ&oi=fnd&pg=PT9&ots=C3eug5eQk_&sig=Tue8yp95_2zuAMi19QytNh_h_TE#v=onepage&q&f=false
Sessa&Der2016AdvBotRes.pdf: chromer
AmanoEtal2016BioScience.pdf: rgbif
MiyaEtal: rfishbase
TennantEtal2016F1000Research.pdf: rplos (https://f1000research.com/articles/5-632/v3)
FroehlichEtal2016Aquaculture.pdf: rfishbase
Iraola&Naya2016Biorxiv.pdf: taxize
Perez-RiverolEtal2016Biorxiv.pdf: ropensci, rnexml
DaffornEtal2016MarineFreshRes.pdf: ropensci
JacobsEtal2015arxiv.pdf: rfigshare, dvn
Schwery&Omeara2016PeerJCompSci.pdf: taxize
BachelotEtal2016EcologicalApplications.pdf: taxize
ButterfieldEtal2016RestEcol.pdf: rgbif
DrostEtal2016biorxiv.pdf: taxize
WagnerEtal2016Biogeosciences.pdf: taxize
HartgerinkEtal2016Peerj.pdf: rplos
Pie2016EcolEntomol.pdf: AntWeb
ReadEtal2016Ecography.pdf: ropensci, paleobiodb
Riva&StoufferOikos.pdf - they don't cite taxize in the paper, but it's used in their github repo with code at https://github.com/gvdr/RDPG_foodweb/blob/master/Code/Ancillary_Code/create_tree.R
NiedballaEtal2016MEE.pdf: taxize
Diplomski_Sribar_KV-DF-SJ-LL.pdf: taxize
Wiser2016JVegScience.pdf: taxize
KamvarEtal2016MolecularEcology.pdf: ropensci
OlsonEtal2015EmergingInfectiousDiseases.pdf: ropensci
WeberEtal2016AnnBot.pdf: taxize
MaddenEtal2016JInterpersonalViolence.pdf: ralmteric
MichonneauEtal2016MEE.pdf: rotl, traits
Wagner2016JVegetationSci.pdf: taxize
HodginsEtal2014MolEcol.pdf: taxize cited in a new book "Invasion Genetics: The Baker and Stebbins Legacy" - the paper essentially combined into this book
Bach2016Thesis.pdf: rgbif used and cited
GBIF-report-task-group-on-GBIF-data-fitness-for-use-in-agrobiodiversity.pdf: rgbif
BuffordEtal2016NewPhyt.pdf: taxize
Vincze2016Evolution.pdf: taxize
NathEtal2016Trees.pdf: taxize
JanssensEtal2016NewPhyt.pdf: rgbif
LovelaceEtal2016arxiv.pdf: stplanr
Wais2016RJournal.pdf: gender
PirhadiEtal2016OpenSourceMolModeling.pdf: webchem
BoschEtal.pdf: http://marinespeed.org/ https://github.com/samuelbosch/marinespeed http://scholar.google.com/scholar_url?url=http://www.vliz.be/imisdocs/publications/293564.pdf&hl=en&sa=X&scisig=AAGBfm2HgNtfkMhqb6QXy6nwOGAu4koFBQ&nossl=1&oi=scholaralrt
GroomEtal2016JAppEcol.pdf: rgbif
JahnEtal2016Peerj.pdf: rcrossref
Eriksson2016Thesis.pdf: taxize, url http://www.diva-portal.org/smash/get/diva2:951404/FULLTEXT01.pdf
Walker2016RJournal.pdf: USABoundaries
DullingerEtal2016Ecography.pdf: rgbif
Sclavi&Herrick2016Biorxiv.pdf: taxize
Macdonald2016Thesis.pdf: ropensci
Lammey2016ScienceEditing.pdf: rcrossref, ropensci
WinslowEtal2016RJournal.pdf: rfigshare, ckanr
FosterEtal2016Biorxiv.pdf: taxize
Sanyal&Decocq2016BMCEvolBiol.pdf: rgbif
AntonelliEtal2016SysBio.pdf: ropensci
SpringerEtal2016MolPhylEvol.pdf: paleobioDB
Lovelace2016_Review_Crooks2016JRegionalSci.pdf: ropensci
Doehmen2016Thesis.pdf: testdat, http://homepages.cwi.nl/~boncz/msc/2016-Doehmen.pdf
LadamEtal2016.pdf: Ladam, C., Harden, J. J., & Windett, J. H. (2016). Does the Election of a Female Governor Influence Women’s Political Ambition?
gutenbergr: http://tidytextmining.com/tidytext.html
riem: https://blog.exploratory.io/riem-package-getting-world-weather-data-in-super-easy-way-78aa94ed45f5#.npmpzs8z8
neotoma and ropensci: https://cdn.rawgit.com/NeotomaDB/Workshops/master/SVP2016/R/Workshop_SVP2016_v0.1.html#a-few-final-thoughts
ropenaq:
- https://medium.com/@openaq/personalizing-the-data-points-following-the-open-data-trail-to-coyhaique-40604278bf71#.xz1i7qb3c
- https://medium.com/@openaq/open-air-quality-fun-with-fireworks-13f9bd47ba36#.99cn52k2s
monkeylearn: https://blog.monkeylearn.com/analyzing-first7jobs-tweets-monkeylearn-r/
Schall2016CEURProceedings.pdf: possibly rgbif, there's a network plot with gbif in there somewhere, find a higher res version. http://ceur-ws.org/Vol-1711/paperDECOSYS2.pdf
Mihaljevic-BrandtEtal2016PlosOne.pdf: gender pkg
Halse-GramkowEtal2016PlantGeneticResources.pdf: taxize
DoyleEtal2017BehavBrainResearch.pdf: plotly
HertlerETal2016NeuroLearningMemory.pdf: plotly
Meyer2016Biorxiv.pdf: plotly
ColeEtal2016Biorxiv.pdf: pdftools
Walker2016SpatialDemography.pdf: plotly
Silva&Meireles2015PoliticHoje.pdf: RSelenium
Dennis - book chapter ---- Dennis, T. (2016). Using R and ggvis to Create Interactive Graphics for Exploratory Data Analysis. Data Visualization: A Guide to Visual Storytelling for Libraries, 149.: rplos
KrakerEtal2016JLibraryCulture.pdf: ropensci, citation: Kraker, P., Kittel, C., & Enkhbayar, A. (2016). Open Knowledge Maps: Creating a Visual Interface to the World’s Scientific Knowledge Based on Natural Language Processing. 027.7 Zeitschrift für Bibliothekskultur/Journal for Library Culture, 4(2), 98-103.
ErdtEtal2016ASISTProceedings.pdf: raltmetric
Lane2016ScholarlyResearchCommunication.pdf: ropensci
Harsch&HilleRisLambers2016Plosone.pdf: geonames
CARMA3.0_FINAL.pdf: geonames (pg 24), citation: Ummel, K. (2012). CARMA revisited: an updated database of carbon dioxide emissions from power plants worldwide. Center for Global Development Working Paper, (304).
Curtis&Bradley2016Plosone.pdf: rgbif
NISORecommendedPractice.pdf: ropensci mentioned, just for scott's participation in working group
CostelloEtal2016Book.pdf. taxize, citation: Costello, M. J., Basher, Z., McLeod, L., Asaad, I., Claus, S., Vandepitte, L., ... & Enevoldsen, H. (2017). Methods for the Study of Marine Biodiversity. In The GEO Handbook on Biodiversity Observation Networks (pp. 129-163). Springer International Publishing.
LiangEtal2016Science.pdf: taxize https://doi.org/10.1126/science.aaf8957
book: Boehmke, B. (2016). Data Wrangling with R.: ropensci
Bradie&Leung2016JBiog.pdf: taxize
Cramer&VerboomJBiog.pdf: taxize
PfenningerEtal2017EnergyPolicy.pdf: ropensci
GillesEtal2016Phytokeys.pdf: cite and uses rgbif
Lundgren&Christin2016JExpBot.pdf: cite and uses rgbif
GalataEtal2016BriefingsBioinformatics.pdf: use and cite taxize
HassallEtal2016Ecography.pdf: use and cite bold pkg
HamptonEtal2015Ecosphere.pdf: use and cite rentrez
NguyenEtal2014PlosCompBiol.pdf: use and cite rentrez
KillenEtal2016JFishBiol.pdf: use and cite rotl
Estrada-Pena&Fuente2016ScientificData.pdf: use and cite rotl
BauerEtal2016SSRNPreprint.pdf: cite fulltext and rcrossref
MackinnonEtal2016MolBiolEvol.pdf: rsnps
Soderholm2016Thesis.pdf: rsnps
Kolb2016AustJStat.pdf: geonames
Ummel2012WhitePaper.pdf: geonames
LebauerEtal2017GCBBioenergy.pdf: traits
http://theubpost.mn/2017/01/12/putting-a-magnifying-glass-on-air-pollution/: ropenaq
http://spatialecology.weebly.com/r-code--data/34: rnoaa (a blog post)
Lucas2017Thesis.pdf: taxize
Baker2017Nature.pdf: ropensci shoutout
MayorEtal2017Nature.pdf: brranching usage, fxn phylomatic_names
Szocs2017Thesis.pdf: chapter on taxize
Rejou-MechainEtal2017MEE.pdf: taxize citation
Puschmann&Ausserhofer2017bookchapter.pdf: ropensci mention (url: http://cbpuschmann.net/pubs/social_data_apis.pdf)
BezerraEtal2017EnvironBiolFish.pdf: rfishbase
ShabanguEtal2017PLoSOne.pdf: rerddap
OdonnellEtal2017PeerJ.pdf: taxize
AntonelliEtal2017SystematicBiology.pdf: ropensci mention
MohiuddinEtal2017WaterResearch.pdf: taxize
RaiEtal2017PLOSNegTropDis.pdf: rgbif
https://wipo-analytics.github.io/scientific-literature-with-rplos.html: rplos
https://wipo-analytics.github.io/patent-analytics-with-plotly.html: plotly
KitzesEtal2017ReprodRes-Book.pdf Marwick chapter: ropensci (https://www.practicereproducibleresearch.org/case-studies/benmarwick.html)
Carvajal-EndaraEtal2017EcoLett.pdf (10.1111/ele.12753): rgbif
Galvez2017Scientometrics.pdf: rplos
PowerEtal2017JBiog.pdf: taxize
Zenil-FergusonEtal2017Evolution.pdf: chromer
SparksEtal2017JOSS.pdf: GSODR
Berlemont2017ScientificReports.pdf: taxize
MartinEtal2017JAnimEcol.pdf: rfishbase
BalaoEtal2017MolEcology.pdf: rgbif
BartomeusEtal2016Biorxiv.pdf: taxize
VoglerEtal.pdf: raltmetric
RosenthalEtal2017AnimBehav.pdf: taxize
Aedo&Pando2017ScientificData.pdf: rgbif (just a mention, not use)
AndruszkiewiczEtal2017PLOSOne.pdf: taxize
Na&Ye2017OnlineInformationReview.pdf: rAltmetric
LahtiEtal2017TheRJournal.pdf: ropensci
Perez-EscobarEtal2017Phytotaxa.pdf: spocc
Singh2017OpenGeoDataSoftwareSta.pdf: helminthR
OHaraEtal2017PloSOne.pdf: worrms
VanderhoevenEtal2017Rio.pdf: (grant proposal) rgbif, spocc
KatzEtal2017arxiv.pdf: mention ropensci - WISSSPE summary
PereiraEtal2017MolPhyEvol.pdf: rgbif
deBayser&Cerqueira2017IEEEConference.pdf: cited ropensci blog post
Bearman2017_whitepaper.pdf: http://huckg.is/gisruk2017/GISRUK_2017_paper_9.pdf stplanr citation, also https://popchange.liverpool.ac.uk/
MccurryEtal2017BiolJLinnSoc.pdf: rfishbase
OrdanoEtal2017FunctionalEcology.pdf: taxize
LehmanEtal2017Sustainability.pdf: ropensci mention (ecoengine sorta too)
MounceEtal2017ResearchIdeasOutcomes.pdf: ropensci mention
PalominoEtal2017CompEnvUrbanSyst.pdf: ropensci mention
LudtEtal2017MarineBiodiversity.pdf: rgbif
AllenEtal2017ManagBiolInvas.pdf: rfishbase
AlfsnesEtal2017Ecology&Evolution.pdf: rgbif, spocc
LahtiEtal2017RIO.pdf: ropensci mention
Araujo&Fontainha2017arxiv.pdf: gender pkg
PedersenEtal2017RoySocOpenScience.pdf: rfishbase
Mulder2017F1000Research.pdf: helminthR
RamEtal2017wssspee.pdf: ropensci mention
SmithEtal2017Arxiv.pdf: ropensci mention
StachelekEtal2017EarthSysSciDataDisc.pdf: magick, tesseract
Funk&Mullen2018AmericanHistoricalReview.pdf: textreuse
DuffyEtal2017BiodiversityResearch.pdf: rgbif
Dulvy&Kindsvater2017bkchapter.pdf: rfishbase
Cicero, C., Spencer, C. L., Bloom, D. A., Guralnick, R. P., Koo, M. S., Otegui, J., ... & Wieczorek, J. R. (2017). Biodiversity Informatics and Data Quality on a Global Scale1. The Extended Specimen: Emerging Frontiers in Collections-Based Ornithological Research.: rvertnet
HutchinsonEtal2017Ecology.pdf: taxize
Coombs&Peters2017DigitalLibraryPerspectives.pdf (Coombs, S. K., & Peters, I. (2017). The Leiden Manifesto Under Review: What Libraries Can Learn From It. Digital Library Perspectives): ropensci mention
Williams, G. J. (2017). The Essentials of Data Science: Knowledge Discovery Using R. CRC Press.: chapter 6.1 has lots of demos with ckanr package
BartomeusEtal2017Oikos.pdf: taxize
Swani&Tyagi2017IRJET.pdf: ropensci blog mention
Bosch2017Thesis.pdf: rgbif
SenderovEtal2017TDWGConfProceedings.pdf: ropensci mention
Smits2017Thesis.pdf: taxize
LoveAnderegg2017Thesis.pdf: taxize
BrownEtal2017PNSIS.pdf: ropensci mention http://dalspace.library.dal.ca/bitstream/handle/10222/72817/Brown%20Kennedy%20Sherin%20Appeltans%20Mills%20%20Laviolette%20PNSIS%2049.1.pdf?sequence=1
CarotaEtal2017whitepaper.pdf: spocc
Winter2017PeerJPreprint.pdf: rentrez
McNamara&Horton2017PeerjPreprint.pdf: ropensci blog mention, the "reproducibility is still hard" post
Rosen2017AssessEvalHighEduc.pdf: gender pkg
MendezEtal2017MEPS.pdf: rerddap pkg
TennantEtal2017F1000Research.pdf: ropensci onboarding mentiona and blog post by Noam
Baumer2017arxiv.pdf: ropensci mention
LeungEtal2017JVirMethods.pdf: taxize
GiroldoEtal2017Oecologia.pdf: brranching
MetzgerEtal2017GeosciModelDevel.pdf: nneo and Rocker images
MarwickEtal2017PeerjPreprint.pdf: ropensci mention
OlsonEtal2017PeerJ.pdf: taxize
ReznikEtal2017CellReports.pdf: taxize
CardosoEtal2017PNAS.pdf: rgbif
Jayasankar2017WhitePaper.pdf: rfishbase, rfisheries
MounceEtal2017NaturePlants.pdf: rgbif
Chamberlain&Boettiger2017PeerjPreprint.pdf: rgbif
(dont have the paper): cites rplos - Li, K., Yan, E., & Feng, Y. (2017). How is R cited in research outputs? Structure, impacts, and citation standard. Journal of Informetrics, 11(4), 989-1002.
TedescoEtal2017ScientificData.pdf: rfishbase
SparksEtal2017JOSSb.pdf: bomrang
PellizzariEtal2017whitepaper.pdf: ropensci mention, specifically the richfitz blog post about reproducibility still hard
Branoff2017GlobalEcolBiog.pdf: taxize
May2017Thesis.pdf: rfishbase, bold
DallasEtal2017EcoLett.pdf: spocc, taxize
Chamberlain&Szocs2013F1000Research.pdf: taxize
Boettiger&Lang2012MEE_treebase.pdf: treebase
MayerEtal2017BiologicalInvasions.pdf: rgbif
Cardoso2017BiodDataJ.pdf: rredlist
LeeEtal2017Code4Lib.pdf, http://journal.code4lib.org/articles/12792: rentrez and ropensci
Veldkamp2017Thesis.pdf: rplos - - citation: Bakker, M., van Assen, M. A. L. M., Crompvoets, E. A. V., Ong, H. H., & Soderberg, C. K. Restriction of opportunistic use of researcher degrees of freedom in pre-registrations on the Open Science Framework. THE HUMAN FALLIBILITY OF SCIENTISTS, 105.
Landis&Schraiber2017PNAS.pdf: rfishbase
WeingartEtal2017DigitalStudies.pdf: gender
ChalmandrierEtal2017SciReports.pdf: rgbif and taxize
Maisak2017IntJBilignualism.pdf: lingtypology
Ramasubramanian, L., & Albrecht, J. (2017). Placemaking: Why Everything Is Local. The Urban Book Series, 87–110. doi:10.1007/978-3-319-68041-5_5 - stplanr
MarxEtal2017.pdf: pdftools
MatthewsEtal2017JAvianBiology.pdf: rotl
RoyEtal2017arXiv.pdf: rsnps
Sanchez-TapiaEtal2017.pdf: rgbif and taxize
- citation: Sánchez-Tapia, A., de Siqueira, M., Lima, R., Barros, F., Gall, G., Gadelha, L., and da Silva, L. Model-R: A Framework for Scalable and Reproducible Ecological Niche Modeling. In High Performance Computing - Fourth Latin American Conference, CARLA 2017. Communications in Computer and Information Science, vol. 796. Springer, 2017 (in press)
DrostEtal2018Bioinformatics.pdf: biomartr, taxize
vandepeerEtal2018ForestEcolManag.pdf: brranching
Sanchez-TapiEtal2017HighPerfComputing.pdf: taxize, rgbif
Albers2017JOSS.pdf: tidyhydat
Dolnicar2018whitepaper.pdf: RSelenium
couldn't get the pdf: "Oldham, K. A., & Weeks, A. (2017). Varieties of Melampyrum Lineare (Orobanchaceae) Revisited. Rhodora." - cites spocc
KrawczykEtal2018NucleicAcidsResearch.pdf: rentrez
Shoub2017.pdf: textreuse https://pdfs.semanticscholar.org/3997/a040748a3bb6a66085240bdf8b771a641efe.pdf
Vaidya2017-thesis.pdf: taxize link: https://search.proquest.com/openview/e04ca58442fa1725c8bc31b2cc0abf0f/1?pq-origsite=gscholar&cbl=18750&diss=y
Selvi&Chandrasekaran2018ClusterComputing.pdf: ropenaq
Serra-DiazEtal2018ForestEcosystems.pdf: rgbif
SinvalEtal2018FrontiersPsychology_a.pdf: skmir
GayEtalTalk.pdf:ckanr link https://orb.binghamton.edu/cgi/viewcontent.cgi?article=1042&context=librarian_fac
SantorelliEtal2018ScientificReports.pdf: rotl
EmerEtal2018EcologyLetters.pdf: taxize
SrivastavaEtal2018Biorxiv.pdf: taxize
KhorramdelazadEtal2018BMCGenomics.pdf: taxize
RuanoEtal2018PlosOne.pdf: raltmetric
Claypool&Patel2018Biorxiv.pdf: rentrez
VitoloEtal2018Earth&SpaceScience.pdf: rdefra
pdftools: can't get pdf. citation: Krotov, V., & Tennyson, M. (2018). Scraping Financial Data from the Web Using R Language. Journal of Emerging Technologies in Accounting.
GoglevaEtal2018Bioinformatics.pdf: biomartr
ChenEtal2018Database.pdf: rentrez
BorcardEtal2018NumericalEcology-Book.pdf: taxize
Cho&Yu2018arXiv.pdf: rcrossref
NaboutEtal2018Scientometrics.pdf: rAltmetric
SanyalEtal2018AmJBot.pdf: rgbif
LakiotakiEtal2018Database.pdf: rentrez
VieilledentEtal2018Biorxiv.pdf: taxize
FosterEtal2018F1000Research.pdf: rgbif, taxize
FarquharsonEtal2018NatureCommunications.pdf: rotl
BemmelsEtal2018Ecography.pdf: rgbif, brranching
NgEtal2018CancerCell.pdf: biomartr mentioned in a table
BennettEtal2018ScientificData.pdf: taxize
CorreiaEtal2018EcologicalIndicators.pdf: taxize
ReibeEtal2018Physiolgenomics.pdf: rentrez
SinvalEtal2018FrontiersPsychology_b.pdf: skmir
BergmannEtal2018AnalytBioanChemistry.pdf: webchem
Tang2018TheRJournal.pdf: plotly/RSelenium
DionEtal2018PoliticalAnalysis.pdf: rcrossref
GeartyEtal2018PNAS.pdf: rgbif
Nolan&Padilla-Parra2018JOSS.pdf: ijtiff
GershanovEtal2018CancerMangResearch.pdf: iheatmapr
PetersEtal2017FrontiersResearchMetricsAnalytics.pdf: oai
Tierney2017JOSS.pdf: visdat
MullenEtal2018JOSS.pdf: tokenizers, textreuse
SalesEtal2017JAnimEcol.pdf: spocc
EsslEtal2017_conf_abstract.pdf: plotly
GrosserEtal2017AustralOrnithology.pdf: rnoaa
BowserEtal2017BiodivDataJournal.pdf: bold
DivollEtal2017MolecularEcology.pdf: bold
CravensEtal2017JAppliedEcology.pdf: bold
FoxEtal2017Biorxiv_preprint.pdf: fingertipsR
TiruEtal2017RomianStatisticalReview.pdf: fingertipsR
Manlove&Belou2018PLOSOne.pdf: gender
BennettEtal2018preprint.pdf: phylotaR (Bennett, D.J.; Hettling, H.; Silvestro, D.; Zizka, A.; Bacon, C.D.; Faurby, S.; Vos, R.A.; Antonelli, A. phylotaR: An automated pipeline for retrieving orthologous DNA sequences from GenBank in R. Preprints 2018, 2018040047 (doi: 10.20944/preprints201804.0047.v1).)
Barnett2018F1000Research.pdf: rentrez
Holmes&Rabosky2018PeerJ.pdf: taxize
Pajo2018SocialScienceComputerReview.pdf: tokenizers
RastrojoEtal2018IntJParisitology.pdf: plotly
Schwamborn2018arXiv.pdf: rfishbase
Schweiger&Svenning2018Oikos.pdf: rgbif
Portugal2018MEE.pdf: rotl
SpalinkEtal2018MolPhyloEvol.pdf: rentrez
Zizka2018Thesis.pdf: rgbif, https://gupea.ub.gu.se/handle/2077/55303
SaadEtal2018ScientificReports.pdf: rgbif
Esarey&BryantInPressPoliticalAnalysis.pdf: rcrossref, citation "Esarey, Justin, and Kristin Bryant. 2018. “Are Papers Written by Women Authors Cited Less Frequently?” Forthcoming at Political Analysis.", link http://jee3.web.rice.edu/gender-citation.pdf
Yee2018Thesis.pdf: taxize, link: http://scholars.wlu.ca/cgi/viewcontent.cgi?article=3153&context=etd, recommended citation: Yee, Lauren. 2018. Spatial Modelling and Wildlife Health Surveillance: A case study of White Nose Syndrome in Ontario. Theses and Dissertations (Comprehensive). 2040. http://scholars.wlu.ca/etd/2040
AhmedEtal2018BMCResearchNotes.pdf: cRegulome
FedererEtal2018PLOSOne.pdf: rplos
GarmendiaEtal2018PeerJ.pdf: writexl
NeubauerEtal2018PLOSOne.pdf: rfishbase
HanEtal2018PLOSOne.pdf: rentrez
BarnecheEtal2018Science.pdf: rotl
SalmonEtal2018EnvironmentalInternational.pdf: rtimicropem, EML
Pearse&Chamberlain2018JOSS.pdf: suppdata
Tang2018JOSS.pdf: plotly
MoatEtal2018ConservationBiology.pdf: rredlist
Inman2018Thesis.pdf: rgbif - "Inman, R. (2018). Improving Species Distribution Models with Bias Correction and Geographically Weighted Regression: Tests of Virtual Species and Past and Present Distributions in North American Deserts (Doctoral dissertation, Arizona State University). https://search.proquest.com/docview/2040502527"
Barber2018Thesis.pdf: rfishbase - "Barber, B. L. (2018). Marine-derived Nutrient Cycling In The St. Croix River, Maine (Doctoral dissertation, The University of Maine). http://usgs-cru-individual-data.s3.amazonaws.com/jzydlewski/thesis_dissert/Barber%20Betsy%20Dissertation%202018-1.pdf"
MachadoEtal2018ScientifcReports.pdf: rentrez
Richmond2018Thesis.pdf: plotly
RastrojoEtal2018IJPDrugsDrugResistance.pdf: plotly
Simchon&Gilead2018CompLingClinPsych.pdf: spelling and hunspell http://www.aclweb.org/anthology/W18-0612
SunEtal2018Nature.pdf: rentrez, plotly
NousiainenEtal2018Bioinformatics.pdf: RSelenium
JaspersEtal2018EuropeanFoodSafetyAuthority.pdf: aRxiv, rbhl, rcrossref, rdatacite, rplos - Jaspers, S., De Troyer, E., & Aerts, M. (2018). Machine learning techniques for the automation of literature reviews and systematic reviews in EFSA. EFSA Supporting Publications, 15(6), 1427E.
Venkat2018Thesis.pdf: tabulizer https://search.proquest.com/docview/2054012866 Venkat, A. (2018). Sub-basin Valuation of Agriculture: A Crop-specific Assessment of Groundwater Footprints and Value in California (Masters thesis, Tufts University).
Hsu2018Thesis.pdf: plotly
KrogsgaardEtal2018Clinical&TranslationalGastroenterology.pdf: plotly
Mienna2018Thesis.pdf: rgbif
Morais&Bellwood2018Fish&Fisheries.pdf: rotl
SchalieEtal2018Nature.pdf: biomartr
OndeiEtal2018Biodiversity&Conservation.pdf: taxize
Hendrickson2018Thesis.pdf: plotly https://search.proquest.com/docview/2056852840 "Hendrickson, P. J. (2018). Ecological Characterization of the Kuparuk River Aufeis Field, North Slope Alaska (Doctoral dissertation, University of Colorado at Boulder)."
SanfordEtal2018SexualMedicine.pdf: plotly
MioduchowskaEtal2018PLOSOne.pdf: rentrez
Casey2018IrishCommunicationReview.pdf: tokenizers
KocEtal2018PeerJ.pdf: plotly
DevlinEtal2018BMCGenomics.pdf: plotly
ZhuEtal2018AIAA_Aviation_Forum.pdf: rnoaa
WiltshireEtal2018DeepSeaResearch.pdf: rgbif
OliveiraEtal2018Diversity.pdf: rgbif
AllawayEtal2018CancerResearch-abstract.pdf: webchem
Sanchez-TapiaEtal2018BiolJLinnSoc.pdf: rgbif
GastauerEtal2018EcologicalInformatics.pdf: rotl, brranching
Nuijten2018.pdf: rplos
ChapmanEtal2018TropicalConservationScience.pdf: rnaturalearth
tesseract: "Kovesdi, C., Le Blanc, K., Spielman, Z., Hill, R., & Oxstrand, J. (2018, July). Quantifying the Contribution of Individual Display Features on Fixation Duration to Support Human-System Interface Design in Nuclear Power Plants. In International Conference on Applied Human Factors and Ergonomics (pp. 453-464). Springer, Cham." (no pdf found)
Becker2018Thesis.pdf: lingtypology
GarmendiaEtal2018PeerJb.pdf: writexl
Sethuraman&Vaishnavi2018IntJPureAppliedMathematics.pdf: plotly
Rodriguez&Piccoli2018conference_abstract.pdf: pdftools
LongbottomEtal2018TheLancet.pdf: spocc
deAraujo&Alves2018ConfPaper.pdf: rAltmetric
RuizEtal2018NucleicAcidsResearch.pdf: iheatmapr
Paseka&Grunberg2018Oikos.pdf: rotl
FinakEtal2018GatesOpenResearch.pdf: DataPackageR
Rojas-GarciaEtal2018Euralex.pdf: crminer
BrazdaEtal2018BiomedResearchInternational.pdf: plotly
FontaineEtal2018PLOSPathogens.pdf: plotly
Lawrence&Bhalla2018PLOSOne.pdf: plotly
Glanz&Pileggi2018ConferencePaper.pdf: plotly
ZhangEtal2018Bioenergy.pdf: plotly
WangEtal2018BiologicalChemistry.pdf: plotly
BrechtmannEtal2018biorxiv.pdf: plotly
KrahEtal2018BMCEvolutionaryBiology.pdf: rusda
BabcockEtal2018FisheriesResearch.pdf: rfishbase
textreuse: paywalled - "García, F. T., Villalba, L. J. G., Orozco, A. L. S., Ruiz, F. D. A., Juárez, A. A., & Kim, T. H. (2018). Locating similar names through locality sensitive hashing and graph theory. Multimedia Tools and Applications, 1-14."
AlmeidaEtal2018Health&Addictions.pdf: skimr
Pierson2018Thesis.pdf: rnoaa
AbolaffioEtal2018ScientificReports.pdf: rerddap
Locard-PauletEtal2018Bioinformatics.pdf: plotly
LortieEtal2018Ecosphere.pdf: rgbif
vanGemert&Andersen2018ICES_JournalOfMarineScience.pdf: rfishbase
Nowosad&Stepinski2018Biorxiv.pdf: NLMR
SciainiEtal018Biorxiv.pdf: NLMR
Vitolo2017JOSS.pdf: hddtools
Majo-VazquezEtal2018SSRNPreprint.pdf: cites but doesn't use skynet ( Majo-Vazquez, Silvia and Nielsen, Rasmus Kleis and González-Bailón, Sandra. 2018. The Backbone Structure of Audience Networks: A New Approach to Comparing Online News Consumption Across Countries. Political Communication, Forthcoming. SSRN, https://ssrn.com/abstract=3194766)
TsuboiEtal2018NatureEcologyEvolution.pdf: taxize
HorvaticEtal2018JournalOfProteomics.pdf: plotly
SamyEtal2018ActaTropica.pdf: spocc (see also shiny app where they said they got GBIF data through spocc http://shiny.conabio.gob.mx:3838/nichetoolb2/ )
Martin-MartinEtal2018arXivpreprint.pdf: cld2 "Martín-Martín, A., Orduna-Malea, E., Thelwall, M., & López-Cózar, E. D. (2018). Google Scholar, Web of Science, and Scopus: a systematic comparison of citations in 252 subject categories. arXiv preprint arXiv:1808.05053."
BharanidharanEtal2018PLOSOne.pdf: plotly
Sanchez-Hernandez&Amundsen2018Fish&Fisheries.pdf: rfishbase
GrenieEtal2018BiologicalConservation.pdf: taxize
MagogaEtal2018ScientificReports.pdf: rentrez
Catalono2018CurrentResearchDigitalHistory.pdf: textreuse "Catalano, J. (2018). Digitally Analyzing the Uneven Ground: Language Borrowing Among Indian Treaties. Current Research in Digital History, 1. doi:10.31835/crdh.2018.02"
KozlovaEtal2018.pdf, rsnps "https://www.researchgate.net/profile/Alexander_Rakitko/publication/327136498_Title_COITR_-_novel_algorithm_for_predicting_child%27s_externally_visible_traits/links/5b7bcd70a6fdcc5f8b585910/Title-COITR-novel-algorithm-for-predicting-childs-externally-visible-traits.pdf"
CanoEtal2018Parasites&Vectors.pdf: opencage
OttenEtal2018EMBOMolecularMedicine.pdf: rentrez
LiuEtal2018confpaper.pdf: hunspell "Liu, C. H., Nowak, A. D., & Smith, P. S. (2018). Asymmetric or Incomplete Information about Asset Values?. http://fmaconferences.org/SanDiego/Papers/LNS_Some_Remarks_Info_Asymmetry_FMA.pdf"
Boria&Blois2018EcologicalModelling.pdf: rgbif
AlbertEtal2018JVegScience.pdf: brranching
Lusseau&Mancini2018arxiv.pdf: rredlist, rgbif "Lusseau, D., & Mancini, F. (2018). A global assessment of tourism and recreation conservation threats to prioritise interventions. arXiv preprint https://arxiv.org/abs/1808.08399"
Abdala-RobertsEtal2018PLOSOne.pdf: scrubr
BarnecheEtal2018GlobalEcologyBiogeography.pdf: rotl
DezordiEtal2018.pdf: rnoaa, "Dezordi, M. L., Hölbig, C. A., Pavan, W., & Fernandes, J. M. C. An R package to access climate change data for South America regionalized by the Eta Model of CPTEC/INPE. https://unfccc.int/resource/docs/natc/branc3es.pdf"
Tierney&Cook2018arXiv.pdf: visdat "Tierney, N. J., & Cook, D. H. (2018). Expanding tidy data principles to facilitate missing data exploration, visualization and assessment of imputations. arXiv preprint arXiv:1809.02264. https://arxiv.org/abs/1809.02264"
YanguezEtal2018NatureCommunications.pdf: rentrez
LonguespeeEtal2018ClinicalProteomicsJournal.pdf: plotly "Longuespée, R., Kriegsmann, K., Cremer, M., Zgorzelski, C., Casadonte, R., Kazdal, D., … Kriegsmann, M. (2018). In MALDI mass spectrometry imaging on formalin-fixed paraffin-embedded tissue specimen section thickness significantly influences m/z peak intensity. PROTEOMICS - Clinical Applications, 1800074. doi:10.1002/prca.20180007"
SchiefferEtal2018JGastrointestinalLiverDisease.pdf: plotly "Schieffer, K. M., Kline, B. P., Harris, L. R., Deiling, S., Koltun, W. A., & Yochum, G. S. (2018). A Differential Host Response to Viral Infection Defines a Subset of Earlier-Onset Diverticulitis Patients. J Gastrointestin Liver Dis, 27(3), 249-255. https://doi.org/10.15403/jgld.2014.1121.273.sch"
TongEtal2018CancerCommunications.pdf: plotly
Niedballa2018Dissertation.pdf: taxize "Niedballa, J. (2018). Managing and Analysing Camera Trapping Data: An Advanced Toolbox (Doctoral dissertation). https://refubium.fu-berlin.de/bitstream/handle/fub188/22961/Dissertation_Niedballa.pdf?sequence=3&isAllowed=y"
Carroll2018CambridgeAssessment.pdf: textreuse, "Carroll, M.J. (2018). Changes in media coverage of GCSEs from 1988 to 2017. Cambridge Assessment Research Report. Cambridge, UK: Cambridge Assessment. http://www.cambridgeassessment.org.uk/Images/504456-changes-in-media-coverage-of-gcses-from-1988-to-2017.pdf"
Lovelace&Morgan2018GISRUKConferenceProceedings.pdf: stplanr "Lovelace, R orcid.org/0000-0001-5679-6536 and Morgan, M (2018) Using Geocomputation to explore the active travel impacts of new roads and railways. In: GISRUK 2018 Conference Proceedings. GISRUK 2018 - 26th Annual GIScience Research UK Conference, 18-20 Apr 2018, Leicester, UK. GISRUK http://eprints.whiterose.ac.uk/135895/1/GISRUK2018_Contribution_121.pdf"
Morzaria-LunaEtal2018Biodiversity&Conservation.pdf: taxize
Dallas&Hastings2018GlobalEcology&Biogeography.pdf: rgbif, scrubr
HawkerEtal2018WaterResourcesResearch.pdf: osmdata
Kim2018IntJTrendResearchDevelopment.pdf: tokenizers
MerklingEtal2017EvolutionaryBiology.pdf: rotl
PfefferEtal2018MalariaJournal.pdf: spocc
GadelhaEtal2018arXiv.pdf: rgbif "Gadelha Jr, L. M., de Siracusa, P. C., Ziviani, A., Dalcin, E. C., Affe, H. M., de Siqueira, M. F., ... & Costa, R. L. (2018). A Survey of e-Biodiversity: Concepts, Practices, and Challenges. arXiv preprint arXiv:1810.00224."
KimmelmanEtlal2018IPSL.pdf: lingtypology
SanchezEtal2018EcologyLetters.pdf: rotl
Denecker&Lelandais2018BMCResearchNotes.pdf: plotly
WylieEtal2018BMCResearchNotes.pdf: plotly
Dayvdov2018NewYorkCityWhitePaper.pdf: plotly
JohnsonEtal2018MolecularNeurodegeneration.pdf: plotly
Haddaway&Westgate2018ConservationBiology.pdf: plotly
Schmidt2018JournalOfCulturalAnalytics.pdf: textreuse
BeckerEtal2018Physiological&BiochecmicalZoology.pdf: rotl
Gordon&Roettger2018LinguisticsVancguard.pdf: lingtypology "Roettger, T., & Gordon, M. (2017). Methodological issues in the study of word stress correlates. Linguistics Vanguard, 3(1). http://www.linguistics.ucsb.edu/faculty/gordon/Roettger&Gordon_AcousticMethodologoy.pdf" doi:10.1515/lingvan-2017-0006
KollarEtal2018ScientificReports.pdf: plotly
Baquero&Machado2018ScientificReports.pdf: tabulizer
RahmanEtal2018NucleicAcidsResearch.pdf: plotly
VieilledentEtal2018Botany.pdf: taxize
McAfeeEtal2018InternationalJournalOfClimatology.pdf: FedData
ShemaEtal2018ConferencePaper.pdf "Shema, H., Mazarakis, A., Hahn, O., & Peters, I. Retractions from altmetric and bibliometric perspectives. http://altmetrics.org/wp-content/uploads/2018/09/altmetrics18_paper_3_Shema_new.pdf": rAltmetric
Borer2018Thesis.pdf: pdftools "Borer, D. (2018). Creating a Water Quality Geodatabase for the West Hawai ‘i Island Region (Doctoral dissertation, University of Southern California). https://spatial.usc.edu/wp-content/uploads/2018/10/72893.pdf"
TestoEtal2018NewPhytologist.pdf: rgbif
HorvaticEtal2018DataInBrief.pdf: plotly
MillaEtal2018NatureEcologyEvolution.pdf: taxize
HagermanEtal2018PreventiveVeterinaryMedicine.pdf: riem
YuEtal2018MolecularBiology&Evolution.pdf: treeio
Degen&Faulwetter2018EarthSystemScienceDataDiscussions.pdf: rfishbase
MilaEtal2018EnvironmentalScience&Technology.pdf: rtimicropem
BarraEtal2018JournalNeurology.pdf: plotly
Ornstein2018Dissertation.pdf: FedData "Ornstein, J. (2018). The Political Economy of Urban Growth. Dissertation. https://deepblue.lib.umich.edu/bitstream/handle/2027.42/145832/ornstein_1.pdf?sequence=1&isAllowed=y"
CleggEtal2018Ecology.pdf: worrms
Guerra-Grenier2018Thesis.pdf: plotly "Guerra-Grenier Jr, E. (2018). Resisting the Pied Piper: Colorful Defense Mechanisms in Insect Eggs, with a Focus on Stink Bugs (Heteroptera: Pentatomidae) (Doctoral dissertation, Carleton University). https://curve.carleton.ca/system/files/etd/6c45742b-6f0e-4fb7-a131-4e7bddc3fb69/etd_pdf/cb0a257b1921794188a309b53d0d614a/guerra-grenier-resistingthepiedpipercolorfuldefensemechanisms.pdf"
OrwollEtal2018TheJournalsOfGerontology.pdf: plotly "Orwoll, E. S., Fino, N. F., Gill, T. M., Cauley, J. A., Strotmeyer, E. S., … Ensrud, K. E. (2018). The relationships between physical performance, activity levels and falls in older men. The Journals of Gerontology: Series A. doi:10.1093/gerona/gly248"
KandlikarEtal2018F1000Research.pdf: cites (but doesn't use) taxize
SmithEtal2018NatureEcologyEvolution.pdf: rgbif (cited an issue only, rest done in python)
CollinsEtal2018CommunicationsBiology.pdf: rgbif, rentrez
BentzEtal2018NatureHumanBehavior.pdf: rgbif
MendezEtal2018Zookeys.pdf: magick
Chatzos2018Thesis.pdf: plotly
Menegotto&Rangel2018NatureCommunications.pdf: rgbif
LyndEtal2018MalariaJournal.pdf: plotly
TicklerEtal2018NatureCommunications.pdf: mentions seaaroundus, but doesn't use it
RobitailleEtal2018biorxiv.pdf: (preprint) spatsoc
Busetto&Ranghetti2016Computers&Geosciences.pdf: MODIStsp
BellonEtal2018RemoteSensing.pdf: MODIStsp
HurtadoEtal2018MalariaJournal.pdf: MODIStsp
RanghettiEtal2018RemoteSensing.pdf: MODIStsp
MouraEtal2019ScienceTotalEnvironment.pdf: MODIStsp
BellonEtal2018IntJAppliedEarthObsGeoinformation.pdf: MODIStsp
ManfronEtal2017IntJAppliedEarthObsGeoinformation.pdf: MODIStsp
ArayaEtal2018EcologicalInformatics.pdf: MODIStsp
AdisaEtal2018Sustainability.pdf: MODIStsp
GranellEtal2017IntJGeoinformation.pdf: MODIStsp
BoschettiEtal2017RemoteSensingEnvironment.pdf: MODIStsp
NutiniEtal2017Sensors.pdf: MODIStsp
BartomeusEtal2018PhillosophicalTransactionsB.pdf: taxize, rgbif
JaricEtal2018GlobalChangeBiology.pdf: rfishbase
WeishauplEtal2018JournalBiologicalChemistry.pdf: magick
PerezEtal2018PhilosophicalTransactionsB.pdf: spocc
AlbrechtEtal2018JMIRmHealth&uHealth.pdf: cld2 "Albrecht, U.-V., Hasenfuß, G., & von Jan, U. (2018). Description of Cardiological Apps From the German App Store: Semiautomated Retrospective App Store Analysis. JMIR mHealth and uHealth, 6(11), e11753. doi:10.2196/11753"
Patel2018JournalAppliedScienceComputations.pdf: tokenizers "Patel, D. 2018. Sentiment Analysis of Harry Potter Book Series using R. http://www.j-asc.com/gallery/66-november-1233.pdf" (not sure this is a real journal, has ISSN, but no DOI)
Varela2018Thesis.pdf: MODIStsp "Varela, S. (2018). Applications of remote sensing in agriculture via unmanned aerial systems and satellites (Doctoral dissertation). http://krex.k-state.edu/dspace/bitstream/handle/2097/39333/SebastianVarela2018.pdf"
GarmendiaEtal2018ScientiaHorticulturae.pdf: writexl
Watts&Miksis-Olds2018whitepaper.pdf: rentrez "Watts, A. W., & Miksis-Olds, J. The Ocean as a Living Sensor: Environmental DNA and Acoustics for Detecting Marine Life. https://phe.rockefeller.edu/eDNAmarine2018/papers/Watts-Miksis-Olds_paper_Ocean_as_a_Living_Sensor.pdf"
HurtadoEtal2018Insects.pdf: MODIStsp
Pietrosemoli&Dobay2018ComputationalCellBiology-book-chapter.pdf: rentrez "Pietrosemoli, N., & Dobay, M. P. (2018). Optimized Protein–Protein Interaction Network Usage with Context Filtering. In Computational Cell Biology (pp. 33-50). Humana Press, New York, NY. https://link.springer.com/protocol/10.1007/978-1-4939-8618-7_2"
Boettiger2018JOSS.pdf: piggyback
AndersonEtal2018_GridHouseholdElectricityDemandStudy_HouseholdAttributeData_v1.0.pdf: skimr "Anderson, B., Eyers, D., Ford, R., Giraldo Ocampo, D., Peniamina, R., Stephenson, J., ... & Jack, M. NZ GREEN Grid Household Electricity Demand Study. http://reshare.ukdataservice.ac.uk/853334/14/NZ_GREEN_GridHouseholdElectricityDemandStudy_HouseholdAttributeData_v1.0.pdf"
SabatiniEtal2018GlobalChangeBiology.pdf: rredlist
Walsh&Cherbuin2018preprintdotorg.pdf: fulltext, roadoi "Walsh, E. I., & Cherbuin, N. (preprint). Mapping the Literature on Nutritional Interventions in Cognitive Health: A Data-Driven Approach. https://www.preprints.org/manuscript/201811.0527/download/final_file"
GeschkeEtal2018JOSS.pdf: rcites
OttEtal2018CancerCell.pdf: iheatmapr
AntonioEtal2018DataInBrief.pdf: skimr
RamEtal2018ComputingScience&Engineering.pdf: ropensci (DONT INCLUDE IN TWEETS)
SoulEtal2018Bioinformatics.pdf: plotly
Aprosio&Moretti2018ConferenceProceedings.pdf: textreuse "Aprosio, A. P., & Moretti, G. (2018). Tint 2.0: An all-inclusive Suite for NLP in Italian. Proceedings of CLIC-it. http://ceur-ws.org/Vol-2253/paper58.pdf"
White&Santy2018JOSS.pdf: ckanr, rdryad, rfigshare, rdatacite
BorsteinEtal2018NatureEcologyEvolution.pdf: rfishbase
HansonEtal2018JAppliedEcology.pdf: rgbif
Evans&Nishioka2018MarineChemistry.pdf: magick
SinvalEtal2018CurrentPsychology.pdf: skimr
PelletierEtal2018PNAS.pdf: taxize
daSilvaEtal2018JournalForNatureConservation.pdf: taxize
VidalEtal2018biorxiv_preprint.pdf: rgbif "Vidal, J. de D., de Souza, A. P., & Koch, I. (2018). Impacts of landscape composition, marginality of distribution, soil fertility, and climatic stability on the patterns of woody plant endemism in the Cerrado. doi:10.1101/362475"
KlineEtal2018DigestiveDiseasesSciences.pdf: plotly
Zill2018Thesis.pdf: plotly "Zill, B. (2018). Enriching the feature space of transfer learning in user analysis in online social networks. Thesis. Universität Koblenz-Landau."
WestEtal2018JournalOfCleanerProduction.pdf: rfishbase
AntaoEtal2019Ecography.pdf: ecoretriever
BlankersEtal2019InternationalJournalOfDrugPolicy.pdf: RSelenium
ODeaEtal2018PreprintEcorxiv.pdf: rotl
Teixeira&Derudder2018UrbanStudies.pdf: paper on skynet itself (DONT INCLUDE IN TWEETS)
Lewis2018Dissertation.pdf: cld2
CholetEtal2019EnvironmentalMicrobiology.pdf: rentrez
DieEtal2018BiorxivPreprint.pdf: rentrez
Leaf&Oshima2019EcologicalInformatics.pdf: rfishbase
WongEtal2018conferenceproceedings.pdf: RSelenium
TreschEtal2019ScienceOfTheTotalEnvironment.pdf: rotl
Weismayer&Pezenka2019BookChapter.pdf: cld2
SodnomovEtal2018IOPConfSerEarthEnvironSci.pdf: MODIStsp
MaiaEtal2018BiorxivPreprint.pdf: magick
LiuEtal2018AgronomyNewZealand.pdf: pdftools
BennettEtal2018JOSS.pdf: restez, rentrez (DONT INCLUDE IN TWEETS)
Cichosz2018IntJApplMathComputSci.pdf: hunspell
Mubeen2018Thesis.pdf: rdflib
MioduchowskaEtal2018PeerJ.pdf: rentrez
Konkolova&Paralic2019Conference.pdf: RSelenium
Green2019AmericanNaturalist.pdf: rotl
RehbachEtal2018JournalOfMultimediaProcessingAndTechnologies.pdf: plotly
SingerEtal2018PLOSOne.pdf: plotly
DuanEtal2018GenomeBiology&Evolution.pdf: plotly
Vantas2018JOSS.pdf: hydroscoper (DONT INCLUDE IN TWEETS)
Alexander&Alexander2019.pdf: hunspell, pdftools
daSilva&Conde2018DataInBrief.pdf: taxize
Sclavi&Herrick2018JournalOfEvolutionaryBiology.pdf: taxize
Lopez-JuradoEtal2018NewPhytologist.pdf: rgbif
Martinkova&Drabinova2018TheRJournal.pdf: plotly
MathotEtal2018BiologicalReviews.pdf: rotl
Chelick2019Thesis.pdf: spocc
RiveroEtal2019ApplicationsInPlantSciences.pdf: chromer
LanghammerEtal2018EcologicalModeling.pdf: landscapetools, NLMR
YeomansEtal2018TheRJournal.pdf: hunspell
SpalinkEtal2019MolecularEcology.pdf: rgbif
BrooksEtal2019MicrobiolResourAnnounc.pdf: rentrez
FiccadentiEtal2018ExpertSystemsWithApplications.pdf: tokenizers
MunozEtal2018JournalOfBiogerentography.pdf: taxize
FaracheEtal2018JournalOfHymenopteraResearch.pdf: rnaturalearth
Shen&Spruit2019AppliedSciences.pdf: plotly
LackiEtal2019AnalyticalChemistry.pdf: plotly
Shang&Ghriga2018JournalOfInformationTechnologyManagement.pdf: plotly
PettersenEtal2019EcologyLetters.pdf: rotl
Duft2018Thesis.pdf: rjsonapi, crul
WaltzEtal2019NaturePlants.pdf: plotly
Dag2018Thesis.pdf: plotly
HofmannEtal2018Biochemistry&MolecularBiologyEducation.pdf: plotly
MunozEtal2019BiodiversityDataJournal.pdf: taxize
SmithEtal2019biorxiv.pdf: taxize
KimEtal2019OpenForumInfectiousDiseases.pdf: iheatmapr
ZuquimEtal2019PlantSoil.pdf: spocc
LeeEtal2019Ecography.pdf: rgbif
MankevichEtal2019HawaiiInternationalConferenceOnSystemSciences.pdf: RSelenium https://scholarspace.manoa.hawaii.edu/bitstream/10125/59710/0270.pdf
KrahEtal2019BiodiversityDataJournal.pdf: RSelenium
LovelaceEtal2019JOSS.pdf: staplanr
LadwigEtal2019Ecosphere.pdf: rgbif
PimientoEtal2019Evolution.pdf: rfishbase
Halsey&White2019ScientificReports.pdf: rotl
Lu&Hedin2019NatureEcologyEvolution.pdf: rgbif
LeeEtal2019PsyArXiv-Preprint.pdf: RSelenium, hunspell https://psyarxiv.com/38zef/
PollakEtal2018BIorxiv-preprint.pdf: plotly https://www.biorxiv.org/content/10.1101/386243v3
TimonenEtal2019Bioinformatics.pdf: plotly
ZizkaEtal2019MethodsEcologyEvolution.pdf: opencage, CoordinateCleaner, rgbif, rnaturalearth, scrubr (dont tweet)
RiceEtal2019NatureEcology&Evolution.pdf: CoordinateCleaner, rgbif, rnaturalearthdata
SellgrenEtal2019TranslationalPsychiatry.pdf: plotly
HicksEtal2019Biorxiv-preprint.pdf: rcrossref
GillEtal2019MolecularEcology.pdf: brranching
JovanovicEtal2019Ecotoxicology&EnvironmentalSafety.pdf: plotly
RiggEtal2019InfectionGenetics&Evolution.pdf: MODIStsp
MarcosEtal2019IntJApplEarthObsGeoinformation.pdf: MODIStsp
Briz-Redon2019ResearchIdeas&Outcomes.pdf: osmdata (just cited)
MartinsEtal2019Biorxiv-preprint.pdf: plotly
KayEtal2019EcosystemServices.pdf: plotly
Nadal-RibellesEtal2019NatureMicrobiology.pdf: plotly
DaruEtal2019GlobalEcology&Biogeography.pdf: rgbif
OhmerEtal2019RoyalSocietyProceedingsB.pdf: rotl
Thomsen&Sigsgaard2019Ecology&Evolution.pdf: taxize
DillenEtal2019BiodiversityDataJournal.pdf: rgbif
LiuEtal2019WhitePaper.pdf: hunspell
JoishEtal2019FutureOncology.pdf: plotly
Fitzpatrick&Dunn2019NatureCommunications.pdf: rnoaa
WheelerEtal2019PlosOne.pdf: plotly
AielloEtal2019JournalOfNeurology.pdf: plotly
Webber&VanderWal2019AnimalBehaviour.pdf: spatsoc
Maljkovic2019Energies.pdf: packagemetrics
Prats&Danis2019KnowledgeManagementAquaticEcosystems.pdf: tabulizer
Fletcher&Fortin2018SpatialEcologyAndConservationModeling-Book.pdf: NLMR
NanavatiEtal2019QuaternaryScienceReviews.pdf: neotoma
Sarkio2019Thesis.pdf: tokenizers
MittermeierEtal2019PLOSBiology.pdf: rgbif, rebird
SrivastavaEtal2019BMCGenomics.pdf: taxize
KargerEtal2019GlobalEcology&Biogeography.pdf: CoordinateCleaner
Olsson-CollentineEtal2019PsychologicalScience.pdf: rcrossref
PoulinEtal2019InternationalJournalforParasitology.pdf: rentrez
PinarEtal2019AnnalsOfMicrobiology.pdf: rgbif
DreyerEtal2019ScientificReports.pdf: rgbif
LudtEtal2019Ecology&Evolution.pdf: rgbif
Peruffo2019MScThesis.pdf: skimr (Peruffo, E. Improving predictive maintenance classifiers of industrial sensors’ data using entropy. A case study. http://trap.ncirl.ie/3429/1/eleonoraperuffo.pdf)
FreeEtal2019Science.pdf & FreeEtal2019Science-supplement.pdf: rfishbase
PhelpsEtal2019Viruses.pdf: rentrez
Angel&Markus2019Bulletin.pdf: rnoaa (Angel, J., & Markus, M. (2019). Frequency Distributions of Heavy Precipitation in Illinois: Updated Bulletin 70. ISWS CR 2019-05. https://www.ideals.illinois.edu/handle/2142/103172)
Mitchell&Moseley2019Biorxiv-Preprint.pdf: RSelenium
Solt2019Draft.pdf: tabulizer (Solt, F. Measuring Income Inequality Across Countries and Over Time: The Standardized World Income Inequality Database [DRAFT]. http://www.globalfactcheck.org/documents/2019-03-08%20Standardized%20World%20Income%20Inequality%20Database.%20updating_swiid%20Solt.pdf)
MichalakEtal2019Biorxiv-Preprint.pdf: plotly
SuEtal2019BMCResearchNotes.pdf: plotly
RavenhallEtal2019BMCBioinformatics.pdf: plotly
KonigEtal2019PlosBiology.pdf: taxize
Higino&Vital2019Ecorxiv-preprint.pdf: taxize (https://doi.org/10.32942/osf.io/c63vj - Higino, G., & Vital, M. V. C. (2019). Mapping and understanding the digital biodiversity knowledge about vertebrates in the Atlantic Rainforest. doi:10.32942/osf.io/c63vj)
colocr: AhmedEtal2019PeerJPreprints.pdf (paper on the software itself)
Rselenium: Rybinski2019Bank&Credit.pdf
taxize: JoEtal2019Algae.pdf
SheffersonEtal2019JournalOfEcology.pdf: rotl
KellyEtal2019NatureCommunications.pdf: plotly
PintoEtal2019BiologicalReviews.pdf: rotl
KonzenEtal2019arXiv-preprint.pdf: weathercan
NghiemEtal2019Environments.pdf: MODIStsp
Harris2019JOSS.pdf: NLMR
MarcosEtal2019IntJAppEarthObsGeoinformation.pdf: MODIStsp
DeFrenneEtal2019NatureEcology&Evolution.pdf: CoordinateCleaner
MatthiasEtal2019Publications.pdf: rcrossref
Medina2019ScientificReports.pdf: rgbif
vanZonneveldEtal2019bioRxiv-reprint.pdf: rgbif (https://www.biorxiv.org/content/biorxiv/early/2019/04/02/596072.full.pdf)
book chapter, book too big to keep here: osmdata (Castro, R., Tierra, A., & Luna, M. (2019). Assessing the Horizontal Positional Accuracy in OpenStreetMap: A Big Data Approach. Lecture Notes in Control and Information Sciences, 513–523. https://doi.org/10.1007/978-3-030-16184-2_49)
ChakrobortyEtal2019JournalOfBiologicalChemistry.pdf: plotly
BlakeyEtal2019Ecology&Evolution.pdf: rnoaa
AxtnerEtal2019GigaScience.pdf: taxize
MirandaEtal2019PLOSOne.pdf: rgbif
Sanger&Warin2019DataInBrief.pdf: textreuse
RodriguesEtal2019IntJSelectionAssessment.pdf: skimr
VanDePerreEtal2019BelgianJournalOfZoology.pdf: rgbif, rredlist (Van de Perre, F., Leirs, H., & Verheyen, E. (2019). Paleoclimate, ecoregion size, and degree of isolation explain regional biodiversity differences among terrestrial vertebrates within the Congo Basin. Belgian Journal of Zoology, 149(1). doi:10.26496/bjz.2019.28)
Chileen2019Thesis.pdf: neotoma (only cited, not used) (Chileen, B. (2019). "Vegetation response to wildfire and climate forcing in a Rocky Mountain lodgepole pine forest over the past 2,500 years"
MeduryEtal2019TransportationResearchRecord.pdf: FedData
CondeEtal2019PNAS.pdf: taxize
HobanEtal2019Ecography.pdf: rgbif (just cited, not used)
PeignierEtal2019Ecology&Evolution.pdf: spatsoc
Campbell2019BookLearnRStudioIDE.pdf: plotly (Campbell, M. (2019). Learn RStudio IDE. doi:10.1007/978-1-4842-4511-8)
Iqbal2019JRiskFinancialManagement.pdf: pdftools
PinskyEtal2019Nature.pdf: rfishbase, rnoaa
BacciEtal2019BotanicalJLinneanSociety.pdf: rgbif
Tese2019Thesis.pdf: rgbif (Domingos, A. M. (2019). Oportunidades e desafios em macroecologia marinha. https://repositorio.bc.ufg.br/tede/bitstream/tede/9530/5/Tese%20-%20Andr%C3%A9%20Menegotto%20Domingos%20-%202019.pdf)
RobbinsEtal2019ConfProceedings.pdf: nasapower mentioned (Robbins, C., Korkmaz, G., Calderon, J. B. S., Chen, D., Schroeder, A., Kelling, C., ... & Keller, S. (2019). The Scope and Impact of Open Source Software as Intangible Capital: A Framework for Measurement with an Application Based on the Use of R Packages. In Big Data for 21st Century Economic Statistics. University of Chicago Press. https://www.nber.org/chapters/c14271.pdf)
SeyednasrollahEtal2019Jphotog&RemoteSensing.pdf: plotly
NicolasEtalPsyarxiv-preprint.pdf: hunspell - preprint (Nicolas, G., Bai, X., & Fiske, S. T. (2019). Automated Dictionary Creation for Analyzing Text: An Illustration from Stereotype Content. https://psyarxiv.com/afm8k/download?format=pdf)
VandenBergEtal2019EnvironmentalScience&Technology.pdf: taxize
vanStrienEtal2019Ecology&Society.pdf: plotly
Bayer&Michael2019arXiv.pdf: hunspell, tesseract
Ruiz&Gomez-Diaz2019BriefingsFunctionalGenomics.pdf: iheatmapr
Baliga&Mehta2019Integrative&ComparativeBiology.pdf: rgbif
Estrela2019Thesis.pdf: assertr (Estrela, M. J. (2019) JCSP 44 PCEMI 44 Master of Defence Studies Maîtrise en études de la défense. https://www.cfc.forces.gc.ca/papers/csc/csc44/mds/estrela.pdf)
FalsterEtal2019Gigascience.pdf: datastorr (the paper describing datastorr)
Barnett&Moher2019F1000Research.pdf: rentrez
KovacevicEtal2019ProceedingsB.pdf: rotl
SchindlerEtal2019workshop.pdf: rplos
PiccioneEtal2019OrgProcessResDev.pdf: plotly
LagodEtal2019Processes.pdf: plotly
Kirsch&Bockmann2019BiophysicalJournal.pdf: plotly
EvansEtal2019Integrative&ComparativeBiology.pdf: phylotaR
ForbesEtal2019WorkingPaper.pdf: eechidna (Jeremy Forbes & Dianne Cook & Rob J Hyndman, 2019. "Spatial modelling of the two-party preferred vote in Australian federal elections: 2001-2016," Monash Econometrics and Business Statistics Working Papers 8/19, Monash University, Department of Econometrics and Business Statistics. https://ideas.repec.org/p/msh/ebswps/2019-8.html)
Colli-SilvaEtal2019JOfBiogeography.pdf: CoordinateCleaner
BhattaraiEtal2019RemoteSensingOfEnvironment.pdf: MODIStsp
PlaczekEtal2019BookBeyondDatabasesArchitecturesAn.pdf: tokenizers (Płaczek, A., Płuciennik, A., Pach, M., Jarząb, M., & Mrozek, D. (2019). The Role of Feature Selection in Text Mining in the Process of Discovering Missing Clinical Annotations – Case Study. Communications in Computer and Information Science, 248–262. https://doi.org/10.1007/978-3-030-19093-4_19)
GermonEtal2019ForestEcology&Management.pdf: plotly
ChambaultEtal2019ProgressInOceanography.pdf: clifro
KtenioudakiEtal2019PostharvestBiology&Technology.pdf: writexl
KadereitEtal2019PlantSystematics&Evolution.pdf: rgbif
AdeolaEtal2019GeospatialHealth.pdf: MODIStsp
SalazarEtal2019Trees.pdf: magick
Best&Halpin2019PlosOne.pdf: plotly
MannEtal2019NucleicAcidsResearch.pdf: rentrez
daSilvaEtal2019confpaper.pdf: RSelenium (da Silva, L. T., de Oliveira, I. L., Dantas, T., & Miranda, V. G. (2019, May). Studies of new data sources and techniques to improve CPI compilation in Brazil. In Paper submitted to the 16th meeting of the Ottawa Group, Rio de Janeiro, Brazil.)
Mitchell2019Thesis.pdf: RSelenium
LinEtal2019NucleicAcidsResearch.pdf: taxize
SporbertEtal2019JournalOfVegetationScience.pdf: taxize doi:10.1111/jvs.12763
SaleckerEtal2019paper.pdf: nlrx (Salecker, Jan; Dislich, Claudia; Wiegand, Kerstin; Meyer, Katrin M.; Pe'er,Guy (2019) : EFForTS-LGraf: A landscape generator for creating smallholder-driven land-use mosaics, EFForTS Discussion Paper Series, No. 29, Collaborative Research Centre990 - EFForTS, Ecological and Socioeconomic Functions of Tropical Lowland RainforestTransformation Systems. https://www.econstor.eu/bitstream/10419/196610/1/1665217219.pdf)
Comrie2019BookCh.pdf: lingtypology (; https://doi.org/10.1007/978-3-319-73400-2_131-1)
VantasEtal2019Water.pdf: hydroscoper
SchubertEtal2019GlobalEcology&Biogeography.pdf: rgbif
SteidingerEtal2019Nature.pdf: taxize
BagleyEtal2019EcologicalIndicators.pdf: taxize
FoisyEtal2019JEcology.pdf: taxize
WestmeijerEtal2019AlgalResearch.pdf: rgbif
OgłuszkaEtal2019ComputerMethods&ProgramsInBiomedicine.pdf: plotly
Kortz&Magurran2019BiologyLetters.pdf: plotly
Perez-PalmaEtal2019NucleicAcidsResearch.pdf: plotly
GreenEtal2019GatesOpenResearch.pdf: hunspell, cld2
Mihalitsis&Bellwood2019CoralReefs.pdf: rotl
KannenbergEtal2019GlobalChangeBiology.pdf: MODIStools
AspillagaEtal2019MethodsInEcology&Evolution.pdf: plotly
GibsonEtal2019ScientificReports.pdf: plotly
SinvalEtal2019AppliedResearchQualityOfLife.pdf: skimr
IsermanEtal2019Workshop-Paper.pdf: hunspell
GoodmanEtal2019JournalOfBiogeography.pdf: rfishbase
FioravantiEtal2019InternationalJOfClimatology.pdf: RSelenium
LogemannEtal2019Chemosphere.pdf: magick
ArifEtal2019NetworkBiology.pdf: rentrez
Wambui&Musenge2019BMCNutrition.pdf: MODIStools
WrightEtal2019Microbiome.pdf: plotly
MeisnerEtal2019Transboundary&EmergingDiseases.pdf: FedData
TetzlaffEtal2019BiologicalConservation.pdf: rotl
Alhajeri&Fourcade2019JournalOfBiogeography.pdf: rredlist, rgbif
BoggsEtal2019Genes.pdf: taxize
Ros-CandeiraEtal2019Zookeys.pdf: rgbif
vanDenderenEtal2019EcoEvoRxiv-Preprint.pdf: rfishbase (Van Denderen, D., Gislason, H., & Andersen, K. H. (2019). Little difference in average fish growth and maximum size across temperatures. EcoEvoRxiv. doi:10.32942/osf.io/8cu4y)
BaileyEtal2019JournalOfAnimalEcology.pdf: plotly
Palacios-AbrantesEtal2019PLOSOne.pdf: taxize
McTavish2019BISS-conference-abstract.pdf: rotl, rgbif mentioned (https://mctavishlab.github.io/BIO144/labs/rotl-rgbif.html)
NyboerEtal2019BiologicalConservation.pdf: rfishbase, rredlist
Krah&Heibl2019JOSS.pdf: phylotar
GrattarolaEtal2019BiodiversityDataJournal.pdf: rredlist, taxize
KravchukEtal2019BBAProteins&Proteomics.pdf: rotl
YenEtal2019UrbanAnalytics&CityScience.pdf: stplanr
FigoEtal2019InternationalJofMolecularSciences.pdf: taxize
KanterakisEtal2019-conference-abstract.pdf: hydroscoper
PetrikEtal2019ProgressInOceanography.pdf: rfishbase
Calderone2019arXiv.pdf: tokenizers
UzmaEtal2019PeerJ.pdf: rgbif
BaylisEtal2019ScientificReports.pdf: rerddap
MorelleEtal2019Transboundary&EmergingDiseases.pdf: osmdata
Waller2019BISS-conference-abstract.pdf: CoordinateCleaner mentioned
ShackletonEtal2019GlobalEcology&Conservation.pdf: rentrez
NelliEtal2019StatisticalMethodsInMedicalResearch.pdf: MODIStsp
NourbakhshEtal2019AmericanJofPathology.pdf: plotly
GlicksbergEtal2019Bioinformatics.pdf: plotly
BrownEtal2019JournalOfNeuroimaging.pdf: tacmagic
HesselbarthEtal2019Ecography.pdf: NLMR, landscapetools
KoppelstaetterEtal2019Computational&StructuralBiotechnologyJournal.pdf: rentrez
NOPDF: pdftools (Calero Valdez A., Ziefle M. (2019) Trends and Changes in the Field of HCI the Last Decade from the Perspective of HCII Conference. In: Kurosu M. (eds) Human-Computer Interaction. Perspectives on Design. HCII 2019. Lecture Notes in Computer Science, vol 11566. Springer, Cham https://doi.org/10.1007/978-3-030-22646-6_3)
AlfaroEtal2019Integrative&ComparativeBiology.pdf: rfishbase
ButterfieldEtal2019Ecology.pdf: rgbif, CoordinateCleaner
KovalenkoEtal2019FreshwaterScience.pdf: rfishbase
FerrazEtal2019ScientificReports.pdf: rentrez
SaxenaEtal2019IEEEConferencePaper.pdf: tesseract
NOPDF: MODIStsp (Pilogallo A., Saganeiti L., Scorza F., Murgante B. (2019) Investigating Urban Growth Dynamic – Land Surface Temperature Relationship. In: Misra S. et al. (eds) Computational Science and Its Applications – ICCSA 2019. ICCSA 2019. Lecture Notes in Computer Science, vol 11621. Springer, Cham https://doi.org/10.1007/978-3-030-24302-9_51)
Sang2019MScThesis.pdf: neotoma (Sang, Zihaohan. No-analog ecological communities since the last glacial maximum inferred from fossil pollen records for North America. Diss. University of Alberta, 2019. https://sites.ualberta.ca/~ahamann/people/pdfs/Sang_2019_MSc.pdf)
XiaEtal2019Cells.pdf: plotly
CarlstromEtal2019NatureCommunications.pdf: plotly
DagEtal2019IntJCompIntSys.pdf: plotly (Dag, Osman, Erdem Karabulut, and Reha Alpar. "GMDH2: Binary Classification via GMDH-Type Neural Network Algorithms—R Package and Web-Based Tool." International Journal of Computational Intelligence Systems (2019). https://download.atlantis-press.com/article/125911202.pdf)
Burkett2019Thesis.pdf: plotly (Burkett, Kaitlyn E. Who Is Ready To Retire: Your Average Life Expectancy And The Savings Needed To Support You. Diss. Appalachian State University, 2019. https://libres.uncg.edu/ir/asu/f/Burkett_Kaitlyn_2019_Thesis.pdf)
Valdez&Madrekar2019Preprintsdotorg-Preprint.pdf: rfishbase
CorreiaEtal2019EcologicalIndicators.pdf: rgbif
LinEtal2019JMIRMedicalInformatics.pdf: hunspell
StoverEtal2019BMCBioinformatics.pdf: RNeXML
MyersEtal2019MolecularEcology.pdf: spocc
WuestEtal2019JournalOfBiogeography.pdf: CoordinateCleaner
PetersEtal2019EcologyLetters.pdf: rotl
DieEtal2019BMCGenomics.pdf: rentrez
SaundersEtal2019arXiv-preprint.pdf: rnoaa (https://arxiv.org/pdf/1907.05750.pdf)
Elsner&Schroder2019preprint.pdf: USABoundaries (https://eartharxiv.org/k9wv6)
HagenEtal2019JounalOfBiogeography.pdf: taxize
Schaik2019BMCMedicalResearchMethodology.pdf: fingertipsR
Abhilash&Sheeba2019JournalOfBiologicalRhythms.pdf: plotly
AlhajeriEtal2019CurrentZoology.pdf: taxize
SaadiEtal2019Water.pdf: FedData
Jaganthan&Dalrymple2019Data.pdf: rgbif
AtickemEtal2019Nature.pdf/AtickemEtal2019Nature-supplement.pdf: rnaturalearth
vanderVeerEtal2019BMCMicrobiology.pdf: plotly
CollinsEtal2019MethodsInEcology&Evolution.pdf: rgbif, bold, rfishbase, rentrez
Petersen&Ekstrom2019JournalOfStatisticalSoftware.pdf: assertr (cited, not used)
WatsonEtal2019BMJGlobalHealth.pdf: rdhs
PiperEtal2019GigaScience.pdf: fulltext, rentrez, bold
Sancho2019Thesis.pdf: rentrez (Macip Sancho, G. 2019. Deciphering host-pathogen interactions at the biomembrane interface, key to target therapeutical approaches against Mycoplasma genitalium. Masters Thesis. Universitat Oberta de Catalunya. http://hdl.handle.net/10609/97806)
Sobreiro2019Thesis.pdf: MODIStsp (Sobreiro, J. F. F. 2019. Vegetation multitemporal responses to hydroclimate variations in the Espinhaço Range (Brazil). Masters Thesis. http://hdl.handle.net/11449/183096)
ZaninEtal2019EuropeanJournalOfWildlifeResearch.pdf: MODIStools
LennoxEtal2019ConservationBiology.pdf: rredlist, taxize
BrionneEtal2019BioDataMining.pdf: plotly
DawsonEtal2019Ecology.pdf: neotoma
LucEtal2019FoodQuality&Preference.pdf: hunspell, spelling (cited only, not used)
Antonio2019Thesis.pdf: skmir (da Conceição António, N. M. (2019). Hotel Revenue Management: Using Data Science to Predict Booking Cancellations (Doctoral dissertation, ISCTE-IUL). https://www.researchgate.net/profile/Nuno_Antonio/publication/334319208_Hotel_Revenue_Management_Using_Data_Science_to_Predict_Booking_Cancellations/links/5d246e94a6fdcc2462ce3339/Hotel-Revenue-Management-Using-Data-Science-to-Predict-Booking-Cancellations.pdf)
HanEtal2019NewPhytologist.pdf: chromer
OFarrellEtal2019PNAS.pdf: rerddap
HaydenEtal2019ScientificReports.pdf: rgbif, rfishbase
PenderEtal2019EcologicalInformatics.pdf: spocc, rgbif, CoordinateCleaner
Park2019PRSLB.pdf: rotl
Esperon-RodriguezEtal2019PlantsPeoplePlanet.pdf: taxize, rgbif
Fernandez-BassoEtal2019AtlantisStudiesInUncertaintyModelling.pdf: plotly
NeugebauerEtal2019PhysiologiaPlantarum.pdf: rentrez
Wagner2019Thesis.pdf: pdftools
LacyEtal2019Hydrobiologia.pdf: rfishbase
Flower2019Thesis.pdf: rgbif,CoordinateCleaner (Flower, C. (2019). Food Plant Biogeography of the Sonoran Desert (Doctoral dissertation, Arizona State University). https://search.proquest.com/docview/2275500833)
Sanchez-Paez&Ortega2019PLOSOne.pdf: rdhs
BenjaminEtal2019DataInBrief.pdf: writexl
WegrzynEtal2019EvolutionaryApplications.pdf: biomartr
MendesEtal2019ConferenceProceedings.pdf: plotly
StewartEtal2019ClinicalScience&Epidemiology.pdf: plotly
LewisEtal2019CellReports.pdf: plotly
GoncalvesETal2019PLOSOne.pdf: plotly
Urquhart-Cronish&Otto2019Facets.pdf: gender
VidalEtal2019MolecularEcology.pdf: brranching
RedmondEtal2019Ecosphere.pdf: brranching
Hanna&Hanna2019Pharmacy.pdf: pdftools
LiEtal2019GlobalChangeBiology.pdf: rotl
HwangEtal2019ComputingScience&Engineering.pdf: pdftools
RamagopalanEtal2019FutureOncology.pdf: hunspell
BayleyEtal2019AquaticConservationMarine&FreshwaterEcosystems.pdf: rfishbase
CazellesEtal2019GlobalChangeBiology.pdf: taxize, rfishbase
FriedmanEtal2019PRSLB.pdf: rfishbase
Sanchez-TojarEtal2019EcoEvoRxiv.pdf: rotl
Mihalitsis&Bellwood2019RSocOpenScience.pdf: rotl
GrecoEtal2019Biogeosciences.pdf: pangaear
EnkhbayarEtal2019arxiv-preprint.pdf: rplos
ReboljEtal2019JournalMedicalScreening.pdf: fingertipsR
SunEtal2019IntJHealthPlanningManagement.pdf: rAltmetric
Soh2019Metabolomics.pdf: biomartR
Dick&He2019PacificFisheryMngtCouncil.pdf: rerddap
VerstraetenEtal2019Aerobiologia.pdf: MODIStsp
DeLucaEtal2019PeerJ.pdf: rgbif
Ondra2019whitepaper.pdf: camsRad
InghamEtal2019Microbiome.pdf: plotly
MooreEtal2019Diversity&Distributions.pdf: plotly
DarboeEtal2019ClinicalInfectiousDiseases.pdf: plotly
LourencoEtal2019MolecularEcology.pdf: NLMR
Dougherty&Nguyen2019PsyArXiv.pdf: rcrossref
Dougherty&Horne2019PsyArXiv.pdf: rcrossref
TokoEtal2019RomanianStatisticalReview.pdf: tokenizers (Toko, Y., Iijima, S., & Sato-Ilic, M. 2019. Generalization for Improvement of the Reliability Score for Autocoding. Romanian Statistical Review, vol 3. http://www.revistadestatistica.ro/wp-content/uploads/2019/09/A5_RRS-3_2019.pdf)
ChattopadhyayEtal2019RSPB.pdf: rgbif
WarrenEtal2019JournalOfBiogeography.pdf: rgbif
AcostaEtal2019Demography.pdf/AcostaEtal2019Demography_supplement.pdf: writexl
Anttila2019Thesis.pdf: writexl (Anttila, P. 2019. The effects of heavy metals on sediment macrofauna. Thesis, University of Helsinki. https://helda.helsinki.fi/handle/10138/303591)
VredenburgEtal2019PlosOne.pdf: FedData
LiEtal2019arXiv.pdf: rentrez
RodriguezEtal2019Biodiversity&Conservation.pdf: spocc
StaudeEtal2019GlobalEcology&Biogeography.pdf: scrubr, taxize
WangEtal2019ScientificData.pdf: neotoma
CinelliEtal2019AnnalsOperationResearch.pdf: hunspell
UmlaufEtal2019arXiv-preprint.pdf: rnaturalearth
Singh2019Thesis.pdf: bomrang
Etherington&Omondiagbe2019JOSS.pdf: NLMR, landscapetools (cited paper, not used the software)
BuffordEtal2019JournalOfEcology.pdf: taxize
notdownloaded: writexl
NalborczykEtal2019PsyArXiv-preprint.pdf: skimr
BagerOlsenEtal2019Oryx.pdf: rredlist
StanstrupEtal2019Metabolites.pdf: webchem
FengEtal2019NatureEcology&Evolution.pdf: CoordinateCleaner
Duffany2019conferencepaper.pdf: hunspell
Maherali2019InternationalJournalofPlantSciences.pdf: rotl
HavingaEtal2019EcologicalIndicators.pdf: rgbif
JinEtal2019conferencepaper.pdf: tokenizers
FecchioEtal2019JournalofAnimalEcology.pdf: MODIStools
ScheffersEtalScience.pdf: rredlist
EnkybayarEtal2019altmetrics19conferencepaper.pdf: rplos
Lewinski&Hasan2019paper.pdf: pdftools
DumitrescuEtal2019InternationalJournalOfClimatology.pdf: rnoaa
YooEtal2019KoreanJournal.pdf: MODIStsp
Kaaronen&Strelkovskii2019PsyArxiv-preprint.pdf: nlrx
SydenhamEtal2019Landscape&UrbanPlanning.pdf: taxize
BottinEtal2019JournalOfVegetationScience.pdf: taxize
Piatscheck2019thesis.pdf: rgbif, spocc, rinat
ReyesEtal2019BMCGenomics.pdf: iheatmapr
Fetter2019Thesis.pdf: rotl
PaudyalEtal2019BMCMicrobiology.pdf: treeio
Bohner&Diez2019EcologyLetters.pdf: brranching
DefolieEtal2019BiologicalReviews.pdf: rotl
BlischakEtal2019F1000Research.pdf: git2r
MillardEtal2019Ecography.pdf: taxize
HungEtal2019FishBiology.pdf: taxize
ChalmandrierEtal2019Ecography.pdf: taxize
Mishra&Tripathi2019JournalOfRamanSpectroscopy.pdf: rplos, rcrossref, fulltext
Christensen&Kenett2019PsyArxiv.pdf: hunspell
ZhongEtal2019CropForage&TurfgrassManagement.pdf: rnoaa
TadaEtal2019Metabolites.pdf: webchem
GryseelsEtal2019Biorxiv.pdf: taxize (Gryseels, S., Watts, T. D., Kabongo, J. M. M., Larsen, B. B., Lemey, P., Muyembe-Tamfum, J. J., ... & Worobey, M. (2019). A near-full-length HIV-1 genome from 1966 recovered from formalin-fixed paraffin-embedded tissue. bioRxiv, 687863.)
WittouckEtal2019mSystems.pdf: rentrez
ORourke2019Thesis.pdf: taxize
HamdiEtal2019jarir.pdf: rtweet (Hamdi, T., Slimi, H., Bounhas, I., & Slimani, Y. Hybrid Approach Based on Graph Embedding and Users Features to Detect Source of Fake News in Twitter Social Network Using Machine Learning. http://jarir.tn/sites/default/files/a.pdf)
RohEtal2019PlosOne.pdf: RSelenium
Sutton&Wilson2019Evolution.pdf: rfishbase
Yang2019SolarEnergy: camsRad (pdf not downloaded) (10.1016/j.solener.2019.10.006)
ZheleznovaEtal2019BiodiversityDataJournal.pdf: taxize
KearneyEtal2019MEE.pdf: rnoaa
DornburgEtal2019BMCEvolutionaryBiology.pdf: rentrez
ElmslieEtal2019TheHolocene.pdf: neotoma
RodewaldEtal2019ScientificReports.pdf: rnaturalearth
OuthwaiteEtal2019ScientificData.pdf: taxize
Schwarz2019paper.pdf: rgbif (Schwarz, M. 2019 Protecting the predators? Assessing the overlap between marine protected areas and endangered shark species on a global scale. http://bit.ly/2QDNbgS)
SmithEtal2019NatureCommunications.pdf: taxize
Ozyildirim2019Thesis.pdf: geojsonio (Hauthal, I. E., & Özyıldırım, E. (2019). Subjective Value Assessment Based on Emojis for Applications in Landscape and Urban Planning (Doctoral dissertation, Department of Geo-information Processing, University of Twente). https://cartographymaster.eu/wp-content/theses/2019_Ozyildirim_Thesis.pdf)
MpandeliEtal2019Weather&ClimateExtremes.pdf: MODIStsp
AhmadEtal2019GlobalEcology&Conservation.pdf: rgbif
FaltynekFricEtal2019EcologyLetters.pdf: rgbif
FirmansyahEtal2019bookchapter (NOT DOWNLOADED): rtweet (Firmansyah, F. M., & Jones, J. J. (2019). Did the Black Panther Movie Make Blacks Blacker? Examining Black Racial Identity on Twitter Before and After the Black Panther Movie Release. Social Informatics, 66–78. doi:10.1007/978-3-030-34971-4_5)
MancinelliEtal2019Water.pdf: taxize
SigsgaardEtal2019ConservationBiology.pdf: taxize
ToussaintEtal2019JournalOfVegetationScience.pdf: taxize
RoddyEtal2019InternationalJournalofPlantSciences.pdf: brranching (Roddy, A. B., Théroux-Rancourt, G., Abbo, T., Benedetti, J. W., Brodersen, C. R., Castro, M., … Simonin, K. A. (2019). The Scaling of Genome Size and Cell Size Limits Maximum Rates of Photosynthesis with Implications for Ecological Strategies. International Journal of Plant Sciences. https://doi.org/10.1086/706186)
MalajEtal2019ScienceOfTheTotalEnvironment.pdf: webchem
Ulibarri&Scott2019GlobalEnvironmentalChange.pdf: pdftools, tokenizers
EspinosaEtal2019ReviewOfPaleobotany&Palynology.pdf: CoordinateCleaner
UphamEtal2019PLOSBiology.pdf: magick
Jin&Yang2019GlobalEcologya&Conservation.pdf: taxize, taxizedb, CoordinateCleaner, scrubr
StevartEtal2019ScienceAdvances.pdf: rredlist, rgbif
DAmen&Azzurro2019ICESJournalOfMarineScience.pdf: rgbif
ZizkaEtal2019Diversity&Distributions.pdf: CoordinateCleaner
KnoplochEtal2019Thesis.pdf: taxize, CoordinateCleaner (Knoploch, C., C. Grinand, G. Vieilledent. 2019. The importance of deforestation and climate change in shaping lemurs’ distributions and identifying their areas of climatic refuges. Thesis. https://www.nitidae.org/files/46082c83/the_importance_of_deforestation_and_climate_change_in_shaping_lemurs_distributions_and_identifying_their_areas_of_climatic_refuges.pdf)
BadreldinEtal2019EnvironmentalMonitoring&Assessment.pdf: MODIStsp
Brown2019Thesis.pdf: tacmagic (Brown, E.E. 2019. Alzheimer’s Disease Pathophysiology and Risk Factors with Amyloid Positron Emission Tomography, an Open Science Approach, and the Consideration of Environmental Exposures. Master's Thesis. https://tspace.library.utoronto.ca/bitstream/1807/97859/1/Brown_Eric_E_201911_MSc_thesis.pdf)
BoothEtal2019JournalOfMedicalInternetResearch.pdf: hunspell
Naess2019Socarxiv-preprint.pdf: rnaturalearth (Næss, M. W. (2019). From hunter-gatherers to nomadic pastoralists: forager bands do not tell the whole story of the evolution of human cooperation. https://doi.org/10.31235/osf.io/9c8bm)
WangEtal2019eLife.pdf: UCSCXenaTools
Thorson2019Fish&Fisheries.pdf: rfishbase
GearyEtal2019JournalOfAnimalEcology.pdf: taxize
HongEtal2019ControlsBigDataAnalysis&Visualization.pdf: FedData
LangeEtal2019NatureCommunications.pdf: biomartR
BaezEtal2019Ecology&Evolutino.pdf: spocc
Estrada-PeñaEtal2019ScientificData.pdf: MODIStsp, rotl
LecocqEtal2019ScientificData.pdf: rfishbase
Reis2019Thesis.pdf: rgbif (Reis, V. S. (2019). Uma perspectiva macroecológica sobre o risco de extinção em mamíferos. Thesis. http://bit.ly/38mfmHG)
not downloaded: camsRad (Yagli, G. M., Yang, D., Gandhi, O., & Srinivasan, D. (2019). Can we justify producing univariate machine-learning forecasts with satellite-derived solar irradiance? Applied Energy, 114122. https://10.1016/j.apenergy.2019.114122)
LiEtal2019Epigenetics&Chromatin.pdf: UCSCXenaTools
Fu&Hughey2019eLife.pdf: rcrossref, rentrez, rAltmetric
GodfreyEtal2019NewPhytologist.pdf: rotl
Zhong2019Thesis.pdf: rnoaa (Zhong, B. (2019). Towards Developing a Double Cropping System Between Winter Barley and Soybean in the Upper Midwest. https://conservancy.umn.edu/bitstream/handle/11299/208973/Zhong_umn_0130M_20797.pdf?sequence=1&isAllowed=y)
BettsEtal2019Science.pdf: NLMR, landscapetools (citation in supplement)
KimEtal2019PediatricDiabetes.pdf: iheatmapr
Atalah&Forrest2019AquacultureEnvironmentInteractions.pdf: clifro
KarakulahEtal2019PeerJ.pdf: biomartr
YusriEtal2019IOPConfSerEarthEnvironSci.pdf: rgbif (Yusri, S., Siregar, V. P., & Suharsono. (2019). Distribution Modelling of Porites (Poritidae) in Indonesia. IOP Conference Series: Earth and Environmental Science, 363, 012025. https://doi.org/10.1088/1755-1315/363/1/012025)
Clark&Luis2019NatureEcology&Evolution.pdf: rotl
EkroosEtal2020BiologicalConservation.pdf: rgbif
Lysne2019Thesis.pdf: visdat (Lysne, V. (2019). Biomarkers of one-carbon metabolism and B-vitamin status: Targeted metabolomics in rats and humans exploring the effects of PPARα-activation and dietary composition. http://bora.uib.no/bitstream/handle/1956/21069/Dt.thesis_2019_Vegard_Lysne.pdf?sequence=1&isAllowed=y)
VitaleEtal2019MolecularGenetics&GenomicMedicine.pdf: rentrez, fulltext
WciselEtal2019-preprint.pdf: rentrez
SansoneEtal2019SexualMedicine.pdf: rtweet
FinneganEtal2019GlobalHealthScience&Practice.pdf: rdhs
KimEtal2020ProgressNeuroPsychopharmacology&BiologicalPsychiatry.pdf: chlorpromazineR
vanderLoo&deJonge2019arxiv.pdf: assertr (van der Loo, M. P., & de Jonge, E. (2019). Data Validation Infrastructure for R. arXiv preprint arXiv:1912.09759. https://arxiv.org/pdf/1912.09759.pdf)
Marshall&Strine2019PeerJ.pdf: rgbif, taxize, CoordinateCleaner, rnaturalearth
Cameron2019Thesis.pdf: weathercan
Pontes2019Thesis.pdf: taxize (Pontes, L. F. V. A. (2019). Biodiversity informatics-entomological data processing, analysis and visualization (Doctoral dissertation) https://repositorio.ul.pt/bitstream/10451/40544/1/ulfc125176_tm_Leonor_Pontes.pdf)
Tancoigne2019JCOM.pdf: rtweet
Hosford&Winters2019TransportFindings.pdf: bikedata
NoeckerEtal2019mSystems.pdf: biomartr
Ruiz-SanchezEtal2019BotanicalSciences.pdf: restez, phylotaR
GreenhalghEtal2019JournalMedia&Religion.pdf: rtweet (https://spencergreenhalgh.com/Greenhalgh_Staudt_Willet_Koehler_2019_Mormon_Identity_and_Practice.pdf)
DieEtal2019preprint.pdf: rentrez
MaiaEtal2019preprint.pdf: magick
Mowinckel&Vidal-Pineiro2019preprint.pdf: magick
ChampagneEtal2019JChemicalEcology.pdf: taxize
BurrowsEtal2019GlobalChangeBiology.pdf: taxize
Avdeev2019whitepaper.pdf: lingtypology (Avdeev, S. (2019). International Collaboration In Higher Education Research: A Gravity Model Approach. Higher School of Economics Research Paper No. WP BRP, 54. https://wp.hse.ru/data/2019/12/18/1523102390/54EDU2019.pdf)
Herrera2019EcologicalMonographs.pdf: brranching
KimEtal2019Algae.pdf: taxize
Hsu2019thesis.pdf: osmdata (Hsu, C. W. (2019). Disparities in public charging infrastructure deployment and inequitable electric vehicle ownership cost based on income and race (Doctoral dissertation, Humboldt State University). http://bit.ly/2MQDAAF)
FatikhunnadaEtal2020RemoteSensing ApplicationsSociety&Environment.pdf: MODIStsp
HansenEtal2019Ecology&Evolution.pdf: taxize
Kovalenko2019thesis.pdf: skmir (Kovalenko, Y. (2019). Stop and smell the grapes : altering cultivar-typical aromas in ‘Gewürztraminer’ (Vitis vinifera L.) berries via regulated deficit irrigation and crop load management (T). University of British Columbia. https://open.library.ubc.ca/cIRcle/collections/ubctheses/24/items/1.0387322)
MiennaEtal2019JournalOfBiogeography.pdf: rgbif
AsevedoEtal2019Palaeo.pdf: CoordinateCleaner
MilaEtal2020ScienceTotalEnvironment.pdf: riem, rtimicropem
NguyenEtal2020EnvironmentalModelling&Software.pdf: MODISTools
Torregroza-EspinosaEtal2019JournalOfMarineSystems.pdf: MODISTools
AkpotiEtal2019ScienceOfTheTotalEnvironment.pdf: MODIStsp
MingioneEtal2020JournalOfBusinessResearch.pdf: rtweet
DAmen&Azzurro2020JournalOfBiogeography.pdf: rgbif
MengEtal2019ProteomeScience.pdf: iheatmapr
CzerneckiEtal2020Sustainability.pdf: rnaturalearth
ShiEtal2020Cellular&MolecularImmunology.pdf: iheatmapr
Lestina2020conference-paper.pdf: pdftools (Lestina, F. Trends in US Foreign Policy Prioritizations, 2000–2019. Proceedings of the 53rd Hawaii International Conference on System Sciences. https://scholarspace.manoa.hawaii.edu/bitstream/10125/63832/0074.pdf)
QuinteroEtal2020JournalOfEcology.pdf: taxize
BlowesEtal2020JournalOfAppliedEcology.pdf: rfishbase
Wunderlich&Memmert2020AppliedSciences.pdf: rtweet
NguyenEtal2020ScientificReports.pdf: MODISTools
CartaEtal2020Biorxiv-preprint.pdf: chromer (https://www.biorxiv.org/content/biorxiv/early/2020/01/06/2020.01.05.893859.full.pdf)
AlvesEtal2020GlobalEcology&Biogeography.pdf: rgbif
Jaric&Djeric2019Sociologija.pdf: cld2, textreuse
CirtwillEtal2020NewPhytologist.pdf: taxize
Leveille-BourretEtal2020MolecularPhylogenetics&Evolution.pdf: rgbif, CoordinateCleaner
Moudry&Devillers2020EcologicalInformatics.pdf: CoordinateCleaner
DengEtal2020CephalalgiaReports.pdf: hunspell
ShanEtal2020ApplicationsInPlantSciences.pdf: rotl
HorneEtal2020PRSLB.pdf: rotl
AkpınarEtal2020Biorxiv-Preprint.pdf: taxize
Milla2020GlobalEcology&Biogeography.pdf: rgbif, CoordinateCleaner
SchererEtal2020Oikos.pdf: NLMR, landscapetools
Burns&Bloom2020PRSLB.pdf: rfishbase
Santos2020: rentrez (not downloaded; "Santos, J. C. (2020). Phylogenetic Analyses of Chemokine Receptors from Sequence Retrieval to Phylogenetic Trees. In Immune Mediators in Cancer (pp. 313-343). Humana, New York, NY." https://link.springer.com/protocol/10.1007/978-1-0716-0247-8_27)
WalczynskaEtal2020Biorxiv-preprint.pdf: rotl
Mathes2020: rnoaa (not downloaded; white paper: "Mathes, S. (2019). The Dynamics of Residential Sorting and Health: Implications of Climate Change in the US. https://sophiemathescom.files.wordpress.com/2019/11/job_market_paper_sophie_mathes-1.pdf")
Theroux-RancourtEtal2020Biorxiv-Preprint.pdf: brranching
LakicevicEtal2020-book (not downloaded, could not access): rgbif (Lakicevic M., Povak N., Reynolds K.M. (2020) Creating Maps. In: Introduction to R for Terrestrial Ecology. Springer, Cham https://link.springer.com/chapter/10.1007/978-3-030-27603-4_3)
WraithEtal2020Ambio.pdf: rgbif
Vincent&Bowler2020mSystems.pdf: rglobi
SewaEtal2020Microbiology&Immunology.pdf: phylogram
YuanEtal2020BiologicalJournalOfTheLinneanSociety.pdf: MODISTools
GilbertsonEtal2020MEE.pdf: spatsoc
BachmanEtal2020BiodiversityDataJournal.pdf: taxize, wicket, rgbif
Benito&Birks2020Ecography.pdf: MODIStools
CeschinEtal2020ScientificReports.pdf: rgbif
vonSchmidtEtal2019InternationalJournalAdvancesInternetTechnology,.pdf: geojsonio (von Schmidt, A., Cyganski, R., & Heinrichs, M. 2019. Web-based Visualization of Daily Mobility Patterns in R. International Journal on Advances in Internet Technology, vol 12 (3 & 4). https://elib.dlr.de/133599/1/inttech_v12_n34_2019_2.pdf)
OliphantEtal2020mSystems.pdf: rentrez
Lourenco2019Thesis.pdf: NLMR (Lourenço, A. F. P. (2019). Eco-evolutionary implications underlying the emergence of a derived reproductive mode in fire salamanders. https://repositorio-aberto.up.pt/bitstream/10216/125665/2/378408.pdf)
Lope&Dolgun2020JournalOfTransportGeography.pdf: pdftools
Tetzlaff2019Dissertation.pdf: rotl
Wiscovitch-RussoEtal2020PLOSONE.pdf: HelminthR, rglobi
NustEtal2020arxiv.pdf: RSelenium (Nüst, D., Eddelbuettel, D., Bennett, D., Cannoodt, R., Clark, D., Daroczi, G., ... & Marwick, B. (2020). The Rockerverse: Packages and Applications for Containerization with R. arXiv preprint arXiv:2001.10641. https://arxiv.org/pdf/2001.10641.pdf)
Perez-GoyaEtal2020arxiv-preprint.pdf: MODIStsp, MODIStools
Senior2020preprint.pdf: fingertipsR (https://doi.org/10.31235/osf.io/rbcz5)
MooneyEtal2020NatureCommunications.pdf: taxize
GagneEtal2020PLOSOne.pdf: taxize
GomezIsazaEtal2020EnvironmentalPollution: rotl (not downloaded; Gomez Isaza, D. F., Cramp, R. L., & Franklin, C. E. (2020). Living in polluted waters: A meta-analysis of the effects of nitrate and interactions with other environmental stressors on freshwater taxa. Environmental Pollution, 114091. https://doi.org/10.1016/j.envpol.2020.114091)
Vilchez-RomanEtal2020InformationDevelopment.pdf: rplos
CaseysETal2020biorxiv-preprint.pdf: iheatmapr
vanZonneveldEtal2020ScientificReports.pdf: rgbif
KimEtal2020Bioinformatics.pdf: biomartr
CallananEtal2020ScienceAdvances.pdf: treeio
Mattatia2020thesis.pdf: CoordinateCleaner ("Mattatia, I. 2020. An empirical assessment of the extent to which the realized niche of bird species is truncated. Masters Thesis. University of Lausanne. https://www.unil.ch/ecospat/files/live/sites/ecospat/files/shared/PDF_site/FirstStep/Mattatia2020_FirstStep.pdf")
AdilEtal2020IEEE.pdf: pdftools
FinoshinEtal2020PLOSOne.pdf: rotl
Pimiento&Benton2020Paleontology.pdf: paleobioDB, rfishbase
Benhadi-MarinEtal2020AnnalsOfAppliedBiology.pdf: rgbif
AhrenfeldtEtal2020ScientificReports.pdf: treeio
CinelliEtal2020arxiv.pdf: hunspell
Alfaro-RamirezEtal2020PLOSOne.pdf: CoordinateCleaner
Martinez-feria&Basso2020ScientificReports.pdf: FedData
RegoEtal2020Microorganisms.pdf: rnaturalearth
CederwallEtal2020CanadianJournalFisheries&AquaticSciences.pdf: taxize
MossionEtal2020biorxiv.pdf: taxize
FunkEtal2020JournalOfMedicalInternetResearch.pdf: hunspell
CorreiaEtal2018FrontiersInGenetics.pdf: skimr
VerdeArregoitiaEtal2020JournalOfMammology.pdf: taxize, pdftools
ShivambuEtal2020BiologicalInvasions.pdf: rgbif
Jhwueng&OMeara2020EvolutionaryBioinformatics.pdf: rotl
CookeEtal2020GlobalEcology&Conservation.pdf: rredlist
Palanisamy2020thesis.pdf: pdftools ("Palanisamy, S. (2019). An analysis on hidden markov model prediction factors using California wildfire and meteorological records (Doctoral dissertation, California State University, Sacramento). https://csus-dspace.calstate.edu/bitstream/handle/10211.3/210201/SHARMILA_MASTERS_REPORT.pdf?sequence=1")
Panayiotou2020InternationalJournalOfArtificialIntelligence&Applications.pdf: rdflib (https://ktisis.cut.ac.cy/bitstream/10488/15757/1/An%20ontological%20analysis.pdf)
JiEtal2020biorxiv.pdf: rredlist
Li&Guo2020PRSLB.pdf: rgbif
SilvaEtal2020biorxiv.pdf: NLMR, landscapetools
Schwalb-WillmannEtal2020MEE.pdf: magick
Perez-LamarqueEtal2020NewPhytologist.pdf: rotl
LarsonEtal2020FunctionalEcology.pdf: brranching
Rodrigues&Boscolo2020EcologicalEntomology.pdf: taxize
ManelEtal2020NatureCommunications.pdf: rfishbase
Thompson2020AmNat.pdf: taxize, rentrez (Thompson, K. A. (2020). Experimental hybridization studies suggest that pleiotropic alleles commonly underlie adaptive divergence between natural populations. The American Naturalist. doi:10.1086/708722)
GentEtal2020Phytopathology.pdf: taxize
Bagheri2019Thesis.pdf: biomartr (Bagheri, H. 2019. Domain-specific language and infrastructure for genomics. Graduate Theses and Dissertations. 17641. https://lib.dr.iastate.edu/etd/17641)
Heisel2020Thesis.pdf: rotl (Heisel, S. E. (2019). Ecological, Genomic, and Social Factors Impacting Wildlife Conservation (Doctoral dissertation, University of Georgia). https://search.proquest.com/docview/2357432037)
HannahEtal2020Ecography.pdf: rgbif
Ryt-HansenEtal2020Virsuses.pdf: treeio
Armitage&Jones2020biorxiv.pdf: CoordinateCleaner
HamidEtal2020bookchapter: rredlist (not downloaded) (Hamid M., Khuroo A.A., Ahmad R., Rasheed S., Malik A.H., Dar G.H. (2020) Threatened Flora of Jammu and Kashmir State. In: Dar G., Khuroo A. (eds) Biodiversity of the Himalaya: Jammu and Kashmir State. Topics in Biodiversity and Conservation, vol 18. Springer, Singapore https://doi.org/10.1007/978-981-32-9174-4_37)
Kaczvinsky&Hardy2020Ecology&Evolution.pdf: taxize
ZizkaEtal2020JournalOfBiogeography.pdf: taxize, rgbif, CoordinateCleaner
JungEtal2020Oecologia.pdf: rgbif
Howard&Cellinese2020Ecology&Evolution.pdf: rgbif
DuEtal2020JournalOfBiogeography.pdf: rgbif
Long&Turner2020AustralianEconomicReview.pdf: skimr
Reyes&Lira-Noriega2020CanadianEntomologist.pdf: spocc
Lara-LizardiEtal2020biorxiv-preprint.pdf: osmdata
Cichosz2020NaturalLanguageEngineering.pdf: hunspell
Pietzke&Vazquez2020preprint.pdf: writexl (Pietzke, M., Vazquez, A. 2020. Metabolite AutoPlotter–an application to automatically process and visualise metabolite data in the web-browser. https://assets.researchsquare.com/files/6b8d169e-e621-4ebd-8c6e-ff607a788ebe/v1/Manuscript.pdf)
KusumotoEtal2020EcologicalResearch.pdf: rgbif
Potter2019thesis.pdf: rfishbase (Potter, R. J. (2019). Machine learning for resource economics: a review of modern computational statistics with empirical applications in fisheries management (Master's thesis). https://openaccess.nhh.no/nhh-xmlui/bitstream/handle/11250/2644607/masterthesis.pdf?sequence=1)
MarshallEtal2020NatureEcologyEvolution.pdf: rotl
AmiriRoudbarEtal2020Heredity.pdf: rsnps
WesenerEtal2020biorxiv-preprint.pdf: nlrx
DeribeEtal2020biorxiv-preprint.pdf: opencage
ParraviciniEtal2020biorxiv-preprint.pdf: rfishbase
VantasEtal2020Water.pdf: hydroscoper
Ashby2020SocArXiv-preprint.pdf: roadoi, rromeo (Ashby, M. P. J. (2020, March 6). Three quarters of new criminological knowledge is hidden from policy makers. https://doi.org/10.31235/osf.io/wnq7h)
Yu2020CurrentProtocols.pdf: treeio
LequimeEtal2020biorxiv-preprint.pdf: treeio
WeiEtal2020biorxiv-preprint.pdf: rotl
Fontanelli&Mansilla2020arxiv-preprint.pdf: rtweet
YoungEtal2020plosone.pdf: taxize, rgbif, rbison
Allen&Kim2020plosone.pdf: rotl
BorgoniEtal2020SocialIndicatorsResearch.pdf: osmdata
Dadi2020Thesis.pdf: skimr (Dadi, B. B. (2020). Modeling malaria cases associated with environmental risk factors in Ethiopia using geographically weighted regression (Doctoral dissertation). http://repositori.uji.es/xmlui/bitstream/handle/10234/187004/TFM_Berhanu.pdf?sequence=1&isAllowed=y)
Pruchnik2020paper.pdf: hunspell (Pruchnik, P. (2020). Identification of Trends in the Polish Media on the Example of the Quarterly Studia Medioznawcze The Use of Big Data Tools. Media Studies, 80(1). http://yadda.icm.edu.pl/yadda/element/bwmeta1.element.desklight-e79ed2c7-fd7d-4a91-8895-c322743c8f48/c/04_Pruchnik_EN.pdf)
PavlovichEtal2020FrontiersInImmunology.pdf: rentrez
HagenEtal2020SocialScienceComputerReview.pdf: rtweet
Chakraborty2020thesis.pdf: MODIStools (Chakraborty, T. (2020). Multi-scale assessment of drought-induced forest dieback (Doctoral dissertation). https://run.unl.pt/bitstream/10362/94403/1/TGEO0243.pdf)
Salgado&Oancea2020arxiv-preprint.pdf: RSelenium
JezequelEtal2020ScientificData.pdf: rfishbase
ChapmanEtal2020BiodiversityInformationScience&Standards.pdf: rgbif
Hamilton&Jacob2020FoodQuality&Preference.pdf: hunspell
RanghettiEtal2020Computers&Geosciences.pdf: geojsonio
Claes&Mantyla2020arxiv.pdf: tokenizers
TrugmanEtal2020PNAS.pdf: brranching
ZushiEtal2020ACSOmega.pdf: webchem
Martins&Boeckx2020PLOSOne.pdf: taxize
Hantgan-Sanko2020.pdf: lingtypology
FraserEtal2020QuantitativeScienceStudies.pdf: RSelenium,rcrossref
StaudeEtal2020NatureEcology&Evolution.pdf: scrubr
Hernandez-RojasEtal2020JournalOfBiogeography.pdf: rgbif
CuiEtal2020NaturePlants.pdf: rotl
TimpanoEtal2020PLOSOne.pdf: taxize
BarenstrauchEtal2020: rentrez (not downloaded) (Bärenstrauch, M., Mann, S., Jacquemin, C., Bibi, S., Sylla, O.-K., Baudouin, E., … Kunz, C. (2020). Molecular crosstalk between the endophyte Paraconiothyrium variabile and the phytopathogen Fusarium oxysporum – Modulation of lipoxygenase activity and beauvericin production during the interaction. Fungal Genetics and Biology, 139, 103383. doi:10.1016/j.fgb.2020.103383)
Zhao&Cao2020: stplanr (discusses only) (Zhao, P., & Cao, Y. (2020). Commuting inequity and its determinants in Shanghai: New findings from big-data analytics. Transport Policy, 92, 20–37. doi:10.1016/j.tranpol.2020.03.006)

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