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pandas throws ValueError: Passed header names mismatches usecols. If I drop usecols, the output of patients.columns is Index(['././@PaxHeader'], dtype='object').
The text was updated successfully, but these errors were encountered:
A few issues.
patients.py
withthe path has the prefix
/Users/kpenner/miniconda3/envs/rtlive/lib/python3.9/site-packages/covid/../data/
Some place like
~/.local/share/covid/data/
is logical.The tutorial should mention that you need to use
download_patient_data()
before you do anything.I have to untar
latestdata.tar.gz
. If I don't and pass the .tar.gz here:covid-model/covid/patients.py
Lines 27 to 32 in cf892d5
pandas throws
ValueError: Passed header names mismatches usecols
. If I dropusecols
, the output ofpatients.columns
isIndex(['././@PaxHeader'], dtype='object')
.The text was updated successfully, but these errors were encountered: