Vignette with pertpy

[deeenes]

Julio Saez-Rodriguez
9:58 PM Nov 15
pertpy is the scverse module for perturbation data. perturbation data in partiuclar is suited for some methods here, so we could already show a link to that. I think if we show how to run from scverse /pertpy something in network commons would make it much more interesting. see email w pablo

Denes Turei
10:41 PM Nov 16
This is a good idea, though to do it properly, (of even in a quick and dirty way), we still need substantial development. In the Discussion we can add a couple of sentences about future plans, and mention scverse & pertpy there.

Julio Saez-Rodriguez
7:32 AM Yesterday
I think this should be the focus of NetComm next. OK to post prerpint without, but what about waiting for that before submitting to journal? as a minimum, during revision

Victor Paton Gonzalez
2:31 PM Yesterday
you mean as a vignette? i think it's realistic but it will require some additional features in NC as denes mentioned.

Julio Saez-Rodriguez
8:39 AM Today
a vignette is good. after posting to biorxiv