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CONP.html
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<!doctype html>
<html lang="en">
<head>
<meta charset="utf-8">
<title>Open Neuroscience</title>
<!-- The important Javascript libraries -->
<link rel="stylesheet" href="css/reveal.css">
<link rel="stylesheet" href="css/theme/black.css" id="theme">
<!-- Code syntax highlighting -->
<link rel="stylesheet" href="lib/css/zenburn.css">
<!-- Printing and PDF exports -->
<script>
var link = document.createElement( 'link' );
link.rel = 'stylesheet';
link.type = 'text/css';
link.href = window.location.search.match( /print-pdf/gi ) ? 'css/print/pdf.css' : 'css/print/paper.css';
document.getElementsByTagName( 'head' )[0].appendChild( link );
</script>
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<script src="lib/js/html5shiv.js"></script>
<![endif]-->
</head>
<body>
<div class="reveal">
<!-- Any section element inside of this container is displayed as a slide -->
<div class="slides">
<section data-background="images/IBIS_image.png">
<h1 style="text-shadow:-1px -1px 0 #000,1px -1px 0 #000,-1px 1px 0 #000,1px 1px 0 #000;">Open Data</h1>
<h4 style="padding-bottom:0px; margin-bottom:0px;text-shadow:-1px -1px 0 #000,1px -1px 0 #000,-1px 1px 0 #000,1px 1px 0 #000;" align="center">The Canadian Open Neuroscience Platform</h4>
<!--ENTER DATE OF PRESENTATION HERE-->
<p style="text-shadow:-1px -1px 0 #000,1px -1px 0 #000,-1px 1px 0 #000,1px 1px 0 #000;"><small>April 29, 2019</small></p>
<p style="text-shadow:-1px -1px 0 #000,1px -1px 0 #000,-1px 1px 0 #000,1px 1px 0 #000;"><small>Samir Das<br>Associate Director of Technology</small></p>
<p style="text-shadow:-1px -1px 0 #000,1px -1px 0 #000,-1px 1px 0 #000,1px 1px 0 #000;"><small><b>McGill Centre for Integrative Neuroscience</b><br><b>Montreal Neurological Institute</b></small></p>
<table class="reveal">
<tr>
<td width="40%" style="vertical-align: middle">
<a href="https://mcin-cnim.ca/" target="_blank"><img src="images/MCIN.png" style="border: 0"></a>
</td>
<td width="15%" style="vertical-align: middle">
<a href="http://www.mcgill.ca/neuro/" target="_blank"><img src="images/Neuro.png" style="border: 0"></a>
</td>
<td width="35%" style="vertical-align: middle">
<a href="http://ludmercentre.ca/" target="_blank"><img src="images/ludmer-new-white.png" style="border: 0"></a>
</td>
</tr>
</table>
</section>
<!-- THE PLAN -->
<section data-transition="fade">
<section>
<h2>The Plan</h2>
</section>
<section data-background="images/CONP.png" data-background-size="100%">
</section>
<!-- How not to share data -->
<section>
<img src="images/Data_sharing_cartoon.png">
</section>
<!-- Principles -->
<section>
<img src="images/FAIR.png">
</section>
<section data-transition="slide" data-background="#87CEEB" data-background-transition="zoom">
<table class="reveal">
<tr>
<td width="50%" style="vertical-align: top">
<img src="images/COBIDAS_Nature_new.png">
</td>
<td width="50%" style="vertical-align: middle">
<img src="images/Open_science_paper.png">
</td>
</tr>
</table>
</section>
<!-- Infrastructure -->
<section>
<img src="images/CONP_architecture.png">
</section>
</section>
<!-- THE DATA -->
<section data-transition="fade">
<section>
<h2>The Data</h2>
</section>
<!-- PreventAD -->
<section>
<img src="images/PreventAD.png" width="87%">
</section>
<!-- Phantom -->
<section>
<img src="images/Phantom.png">
</section>
<!-- All the data in CONP -->
<section>
<img src="images/CONP_dataset.png">
</section>
<section>
<img src="images/CONP_future.png">
</section>
<section>
<h2>Would you like to contribute?</h2>
</section>
</section>
<!-- THE PROCESS -->
<section data-transition="fade">
<section data-background-transition="zoom">
<h2>The Process</h2>
</section>
<section>
<h2>Ethics</h2>
<img src="images/Registered_access.png">
</section>
<section data-background="images/LORIS_full_functionality.png" data-background-size="100%"> <h2><font color="black">Curation</font></h2>
</section>
<section>
<img src="images/loris_arch.png" width="87%">
</section>
<section>
<img src="images/QC.png">
</section>
<section>
<h2>Quality Control</h2>
<img src="images/brain-background.png">
</section>
<section>
<a href="https://docs.google.com/document/d/1V53TE4snfhv_1xpk3FJYHTC1NdFYA6TPfkt6n308hqg/edit?ts=5c9a4351#" target="_blank"><img src="images/Open_science_checklist.png" style="border: 0"></a>
</section>
<section data-background="images/api_background.jpg" data-background-size="100%">
<h2><font color="black">API enahcments</font></h2>
</section>
<section>
<h2>Datalad crawler & extractor</h2>
<img src="images/Datalad.png">
</section>
<!--Interoperability-->
<section data-background="images/Interoperability.jpg" data-background-size="65%">
</section>
</section>
<!-- Data Access-->
<section data-transition="fade">
<!-- How to access the data -->
<section>
<a href="https://openpreventad.loris.ca" target="_blank"><img src="images/Open_PreventAD_LORIS.png"></a>
</section>
<section data-background-transition="zoom">
<img src="images/Open_PreventAD_dashboard.png">
</section>
<section>
<img src="images/Open_PreventAD_list.png">
</section>
<section>
<a href="https://openpreventad.loris.ca/document_repository/ajax/GetFile.php?File=admin%2FHow%20to%20get%20the%20data.pdf" target="_blank"><img src="images/Download_PreventAD.png"></a>
</section>
<section>
<img src="images/PreventAD_MRI.png">
</section>
<section>
<h3>Publication being submitted to Scientific Data</h3>
<a href="http://prevent-alzheimer.net" target="_blank">http://prevent-alzheimer.net</a>
</section>
<!-- How to access the data -->
<section>
<img src="images/CONP_Portal.png">
</section>
<section>
<img src="images/CONP_PreventAD.png">
</section>
<section>
<img src="images/CONP_Portal_Datasets.png">
</section>
<section>
<h2>Many details and questions: Registered versus open. Other modlities. Why we chose these variables to go open? Is your study ready to go open?</h2>
</section>
</section>
<!--Acknowledgements-->
<section data-transition="slide" data-background="#87CEEB" data-background-transition="zoom">
<table class="reveal">
<tr>
<td width="50%" style="vertical-align: top">
<img src="images/Kitty.png">
</td>
<td width="50%" style="vertical-align: middle">
<p>Thank you!<small><font color="blue" size="4">Acknowledgements:</font><font color="black" size="2">Cecile Madjar, Jennifer Mercier-Tremblay, Justin Kat, Sanitago Paiva, Dave MacFarlane, Melanie Legault, Alizee Wickenheizer, Xavier Lecours-Boucher, Shawn Brown, Pierre Rioux, Tristan Glatard, Jason Karamchandani, Derek Lo, Pamela Patterson, Pierre Bellec, Jean Baptiste Poline, Simon Duchense, John Breitner, Judes Poirier, Sylvia Villeneuve, the PreventAD team... and Alan Evans.</font></small></p>
</td>
</tr>
</table>
</section>
</div>
</div>
<script src="lib/js/head.min.js"></script>
<script src="js/reveal.js"></script>
<script>
// Full list of configuration options available at:
// https://github.com/hakimel/reveal.js#configuration
Reveal.initialize({
controls: true,
progress: true,
history: true,
center: true,
transition: 'slide', // none/fade/slide/convex/concave/zoom
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</body>
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