From ca86a50171b9f3ec9be885e25f6fa20182728843 Mon Sep 17 00:00:00 2001
From: Tyler Chafin <tc25@sanger.ac.uk>
Date: Thu, 11 Jul 2024 16:53:41 +0100
Subject: [PATCH] Update modules/local/samtools_replaceheader.nf

Co-authored-by: Matthieu Muffato <cortexspam-github@yahoo.fr>
---
 modules/local/samtools_replaceheader.nf | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/modules/local/samtools_replaceheader.nf b/modules/local/samtools_replaceheader.nf
index 0a027c8..09ac4fc 100644
--- a/modules/local/samtools_replaceheader.nf
+++ b/modules/local/samtools_replaceheader.nf
@@ -12,8 +12,8 @@ process SAMTOOLS_REHEADER {
     path(header)
 
     output:
-    tuple val(meta), path("${prefix}.${suffix}"), optional:true, emit: bam
-    tuple val(meta), path("${prefix}.${suffix}"), optional:true, emit: cram
+    tuple val(meta), path("${prefix}.bam") , optional:true, emit: bam
+    tuple val(meta), path("${prefix}.cram"), optional:true, emit: cram
     path "versions.yml", emit: versions
 
     when: