From e1d62a96ec5ead08b3222b4783f73cd256f84b1d Mon Sep 17 00:00:00 2001
From: James Hay <9113187+jameshay218@users.noreply.github.com>
Date: Fri, 17 May 2024 12:54:33 +0100
Subject: [PATCH] Update par_tab_base.csv

---
 inst/extdata/par_tab_base.csv | 30 +++++++++++++++---------------
 1 file changed, 15 insertions(+), 15 deletions(-)

diff --git a/inst/extdata/par_tab_base.csv b/inst/extdata/par_tab_base.csv
index 3c36783..db1b860 100644
--- a/inst/extdata/par_tab_base.csv
+++ b/inst/extdata/par_tab_base.csv
@@ -1,15 +1,15 @@
-"","names","values","fixed","lower_bound","upper_bound","lower_start","upper_start","par_type","stratification","biomarker_group"
-"1","boost_long",1.8,0,0,8,1,3,1,NA,1
-"2","boost_short",2.7,0,0,8,2,3,1,NA,1
-"3","boost_delay",0,1,0,10,0,10,1,NA,1
-"4","antigenic_seniority",0.05,0,0,1,0.01,0.1,1,NA,1
-"5","wane_long",0,1,0,1,0.001,0.02,1,NA,1
-"6","wane_short",0.2,0,0,1,0.01,0.1,1,NA,1
-"7","cr_long",0.1,0,0,1,0.1,0.2,1,NA,1
-"8","cr_short",0.03,0,0,1,0.01,0.1,1,NA,1
-"9","min_measurement",0,1,0,0,0,0,1,NA,1
-"10","max_measurement",8,1,8,8,8,8,1,NA,1
-"11","obs_sd",1,0,0,25,0.5,2,1,NA,1
-"12","infection_model_prior_shape1",1,1,0,1000,0,1000,2,NA,1
-"13","infection_model_prior_shape2",1,1,0,1000,0,1000,2,NA,1
-"14","antibody_dependent_boosting",0,1,0,1,0,1,1,NA,1
+names,values,fixed,lower_bound,upper_bound,lower_start,upper_start,par_type,stratification,biomarker_group
+boost_long,1.8,0,0,8,1,3,1,NA,1
+boost_short,2.7,0,0,8,2,3,1,NA,1
+boost_delay,0,1,0,10,0,10,1,NA,1
+antigenic_seniority,0.05,0,0,1,0.01,0.1,1,NA,1
+wane_long,0,1,0,1,0.001,0.02,1,NA,1
+wane_short,0.2,0,0,1,0.01,0.1,1,NA,1
+cr_long,0.1,0,0,1,0.1,0.2,1,NA,1
+cr_short,0.03,0,0,1,0.01,0.1,1,NA,1
+min_measurement,0,1,0,0,0,0,1,NA,1
+max_measurement,8,1,8,8,8,8,1,NA,1
+obs_sd,1,0,0,25,0.5,2,1,NA,1
+infection_model_prior_shape1,1,1,0,1000,0,1000,2,NA,1
+infection_model_prior_shape2,1,1,0,1000,0,1000,2,NA,1
+antibody_dependent_boosting,0,1,0,1,0,1,1,NA,1
\ No newline at end of file