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Error when running JuLI on larger BAM files #8

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nvolkovaGEL opened this issue Jul 24, 2020 · 0 comments
Open

Error when running JuLI on larger BAM files #8

nvolkovaGEL opened this issue Jul 24, 2020 · 0 comments

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@nvolkovaGEL
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nvolkovaGEL commented Jul 24, 2020

Hi,
I've been trying to apply JuLI to a BAM file covering a larger span of target regions (e.g. 1000 genes instead of 10-20), and ended up with a following error:

Error in { : task 74 failed - "key 5 not in lookup table"
Calls: callfusion -> %dopar% -> <Anonymous>
Execution halted

Or this one:

Error in { : task 876 failed - "key 3 not in lookup table"
Calls: callfusion -> %dopar% -> <Anonymous>
Execution halted

Task numbers may be different (74, 5556, 5852, etc.), but the error content is the same. Do you have any suggestion about how to fix this apart from cutting the BAM file into smaller non-intersecting pieces?.. Thanks!

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