Skip to content

Actions: smithlabcode/dnmtools

Actions

All workflows

Actions

Loading...
Loading

Showing runs from all workflows
218 workflow runs
218 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

Remove or add back non-covered sites from compressed counts files DNMTools distribution check on Ubuntu #158: Pull request #190 synchronize by andrewdavidsmith
November 29, 2023 22:29 4m 6s temporary-rezip-counts
temporary-rezip-counts
November 29, 2023 22:29 4m 6s
Merge pull request #189 from smithlabcode/amrfinder-ensure-blocks-non… DNMTools distribution check on Ubuntu #157: Commit 7ae8170 pushed by andrewdavidsmith
November 28, 2023 04:34 3m 58s master
master
November 28, 2023 04:34 3m 58s
amrfinder: ensuring the block bounds are set without a possible infinite loop DNMTools distribution check on Ubuntu #156: Pull request #189 opened by andrewdavidsmith
November 28, 2023 04:30 3m 57s amrfinder-ensure-blocks-nonempty
amrfinder-ensure-blocks-nonempty
November 28, 2023 04:30 3m 57s
Merge pull request #188 from smithlabcode/amrfinder-correct-for-read-… DNMTools distribution check on Ubuntu #155: Commit b6c2b07 pushed by andrewdavidsmith
November 28, 2023 03:41 3m 58s master
master
November 28, 2023 03:41 3m 58s
amrfinder correct for read counts DNMTools distribution check on Ubuntu #154: Pull request #188 opened by andrewdavidsmith
November 28, 2023 03:36 4m 9s amrfinder-correct-for-read-counts
amrfinder-correct-for-read-counts
November 28, 2023 03:36 4m 9s
Merge pull request #187 from smithlabcode/roi-regions-regular-file DNMTools distribution check on Ubuntu #153: Commit 0de6ad4 pushed by andrewdavidsmith
November 27, 2023 01:58 4m 13s master
master
November 27, 2023 01:58 4m 13s
roi regions must be regular file DNMTools distribution check on Ubuntu #152: Pull request #187 opened by andrewdavidsmith
November 26, 2023 03:09 4m 3s roi-regions-regular-file
roi-regions-regular-file
November 26, 2023 03:09 4m 3s
Merge pull request #186 from smithlabcode/amrfinder DNMTools distribution check on Ubuntu #151: Commit fd59ec9 pushed by masarunakajima
November 26, 2023 02:25 3m 59s master
master
November 26, 2023 02:25 3m 59s
fixed a bug in accumulating read lengths DNMTools distribution check on Ubuntu #150: Pull request #186 opened by masarunakajima
November 26, 2023 02:07 4m 8s amrfinder
amrfinder
November 26, 2023 02:07 4m 8s
Merge pull request #185 from smithlabcode/cpg-sites-bedgraph DNMTools distribution check on Ubuntu #149: Commit cd4003a pushed by andrewdavidsmith
November 15, 2023 21:36 4m 15s master
master
November 15, 2023 21:36 4m 15s
Sites track for CpGs and other kmers DNMTools distribution check on Ubuntu #148: Pull request #185 opened by andrewdavidsmith
November 15, 2023 21:31 4m 18s cpg-sites-bedgraph
cpg-sites-bedgraph
November 15, 2023 21:31 4m 18s
Merge pull request #184 from smithlabcode/amrfinder-summary-when-no-a… DNMTools distribution check on Ubuntu #147: Commit 003c2cb pushed by andrewdavidsmith
November 13, 2023 01:31 4m 16s master
master
November 13, 2023 01:31 4m 16s
amrfinder summary when no amrs DNMTools distribution check on Ubuntu #146: Pull request #184 opened by andrewdavidsmith
November 13, 2023 00:57 4m 22s amrfinder-summary-when-no-amrs-found
amrfinder-summary-when-no-amrs-found
November 13, 2023 00:57 4m 22s
Merge pull request #183 from smithlabcode/merge-tabular-pandas-header DNMTools distribution check on Ubuntu #145: Commit 0e470ce pushed by andrewdavidsmith
November 8, 2023 19:47 6m 10s master
master
November 8, 2023 19:47 6m 10s
Tabular format for merge gets first column header option DNMTools distribution check on Ubuntu #144: Pull request #183 opened by andrewdavidsmith
November 8, 2023 19:38 4m 5s merge-tabular-pandas-header
merge-tabular-pandas-header
November 8, 2023 19:38 4m 5s
Merge pull request #182 from smithlabcode/amrfinder-no-threads-decomp… DNMTools distribution check on Ubuntu #143: Commit 2264b43 pushed by andrewdavidsmith
November 6, 2023 01:32 6m 11s master
master
November 6, 2023 01:32 6m 11s
amrfinder no threaded io DNMTools distribution check on Ubuntu #142: Pull request #182 opened by andrewdavidsmith
November 6, 2023 01:27 4m 55s amrfinder-no-threads-decompression
amrfinder-no-threads-decompression
November 6, 2023 01:27 4m 55s
Merge pull request #181 from smithlabcode/counts-covered-only DNMTools distribution check on Ubuntu #141: Commit c75c530 pushed by andrewdavidsmith
November 3, 2023 20:14 4m 49s master
master
November 3, 2023 20:14 4m 49s
Counts output covered sites only DNMTools distribution check on Ubuntu #140: Pull request #181 opened by andrewdavidsmith
November 3, 2023 20:06 5m 6s counts-covered-only
counts-covered-only
November 3, 2023 20:06 5m 6s
Merge pull request #180 from smithlabcode/hmr-nothing-found-bugfix DNMTools distribution check on Ubuntu #139: Commit 4f1c3b2 pushed by andrewdavidsmith
November 2, 2023 19:17 5m 54s master
master
November 2, 2023 19:17 5m 54s
Fixes #179. Checking that hmrs are found before attempting to get their scores DNMTools distribution check on Ubuntu #138: Pull request #180 opened by andrewdavidsmith
November 2, 2023 19:10 6m 7s hmr-nothing-found-bugfix
hmr-nothing-found-bugfix
November 2, 2023 19:10 6m 7s
Merge pull request #177 from smithlabcode/exit-success-on-insufficien… DNMTools distribution check on Ubuntu #137: Commit 756213e pushed by andrewdavidsmith
October 28, 2023 21:57 4m 52s master
master
October 28, 2023 21:57 4m 52s
HMR exit success on insufficient data DNMTools distribution check on Ubuntu #136: Pull request #177 opened by andrewdavidsmith
October 28, 2023 21:51 5m 33s exit-success-on-insufficient-data
exit-success-on-insufficient-data
October 28, 2023 21:51 5m 33s
Merge pull request #176 from smithlabcode/hmr-summary-on-error DNMTools distribution check on Ubuntu #135: Commit 425804c pushed by andrewdavidsmith
October 28, 2023 21:38 5m 52s master
master
October 28, 2023 21:38 5m 52s
HMRs summary on insufficient data DNMTools distribution check on Ubuntu #134: Pull request #176 opened by andrewdavidsmith
October 28, 2023 21:29 5m 6s hmr-summary-on-error
hmr-summary-on-error
October 28, 2023 21:29 5m 6s