From e4467dbe5c08bef0a1370e35431d11da4022dd41 Mon Sep 17 00:00:00 2001 From: Andrew D Smith Date: Sun, 8 Oct 2023 17:54:53 -0700 Subject: [PATCH 1/2] Updating submodules --- src/abismal | 2 +- src/smithlab_cpp | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/src/abismal b/src/abismal index b990b63b..e97557b8 160000 --- a/src/abismal +++ b/src/abismal @@ -1 +1 @@ -Subproject commit b990b63b7a49b235500f5fde88fb7512a22308d5 +Subproject commit e97557b83b62cbb3652d0cf6ef802391aedfe2ee diff --git a/src/smithlab_cpp b/src/smithlab_cpp index 5645567b..f80f5f6c 160000 --- a/src/smithlab_cpp +++ b/src/smithlab_cpp @@ -1 +1 @@ -Subproject commit 5645567ba5046d1c5d3d1fa7c9fd4822b73dbdd6 +Subproject commit f80f5f6cf38ae1af9acb4ba77330cd9d25d1de81 From 94b20fcbb23ab640ac30954ffbffe43b8ed4bf69 Mon Sep 17 00:00:00 2001 From: Andrew D Smith Date: Sun, 8 Oct 2023 18:39:09 -0700 Subject: [PATCH 2/2] tests: updating md5sums to correspond with new v3.2.2 of abismal as submodule --- data/md5sum.txt | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/data/md5sum.txt b/data/md5sum.txt index 33e07837..39ad4881 100644 --- a/data/md5sum.txt +++ b/data/md5sum.txt @@ -10,7 +10,6 @@ b38d571baaf2bc16646dbd14a7edb770 tests/reads.epiread af8b97ef25af8a16ced1537ca4a74d07 tests/reads.hmr 52d44c4c1d6891b45741f573f51e67cd tests/reads.levels 916fe07a1d03449b65dfc1458d7c1c40 tests/reads.mstats -65816bee34b977adf1dd798fbf85d758 tests/reads.sam 1aecbb2b12bd867405118eae42de6743 tests/reads.ustats bcbf01be810cbf4051292813eb6b9225 tests/tRex1.idx 7c84dafb85252a04a45704da71eba7c4 tests/tRex1_promoters.roi.bed @@ -18,5 +17,6 @@ e7e9590475a7f9b1ae41701d81892e57 tests/two_epialleles.amr ec6a686617cad31e9f7a37a3d378e6ed tests/two_epialleles.states 93e38b20d162062a5d147c4290095a13 tests/mlml.out d947fe3d61ef7b1564558a69608f0e64 tests/methylome.pmd -3f4241b03027961ae4753644dbd2a2b4 tests/reads.fmt.sam -0089ea4ef0e36f91c48275630599e79b tests/reads.fmt.srt.uniq.sam +7d481d31e4316e97d519838f4887b10d tests/reads.sam +4b038c82b51be15307d4969e859e864f tests/reads.fmt.sam +a7b94dd23f308f653fbfab98ec7b62d8 tests/reads.fmt.srt.uniq.sam