Feature/init command

pyproject.toml

@@ -50,6 +50,8 @@ pyparsing = "^3.0.9"
 requests = "^2.28.1"
 pydantic = "^2.5.1"
 pydantic-settings = "^2.1.0"
+requests-oauthlib = "^2.0.0"
+pynacl = "^1.5.0"
 
 [tool.poetry.group.dev.dependencies]
 pytest = "^7.1.1"

src/hermes/commands/__init__.py

@@ -10,6 +10,7 @@
 
 from hermes.commands.base import HermesHelpCommand
 from hermes.commands.clean.base import HermesCleanCommand
+from hermes.commands.init.base import HermesInitCommand
 from hermes.commands.curate.base import HermesCurateCommand
 from hermes.commands.harvest.base import HermesHarvestCommand
 from hermes.commands.process.base import HermesProcessCommand

src/hermes/commands/cli.py

@@ -13,7 +13,7 @@
 
 from hermes import logger
 from hermes.commands import HermesHelpCommand, HermesCleanCommand, HermesHarvestCommand, HermesProcessCommand, \
-                            HermesCurateCommand, HermesDepositCommand, HermesPostprocessCommand
+                            HermesCurateCommand, HermesDepositCommand, HermesPostprocessCommand, HermesInitCommand
 from hermes.commands.base import HermesCommand
 
 
@@ -36,6 +36,7 @@ def main() -> None:
 
     for command in (
             HermesHelpCommand(parser),
+            HermesInitCommand(parser),
             HermesCleanCommand(parser),
             HermesHarvestCommand(parser),
             HermesProcessCommand(parser),

src/hermes/commands/deposit/invenio.py

@@ -267,6 +267,21 @@ def __init__(self, command: HermesDepositCommand, ctx: CodeMetaContext, client=N
 
         if client is None:
             auth_token = self.config.auth_token
+
+            # TODO reactivate this code again, once we use Zenodo OAuth again (once the refresh token works)
+            # If auth_token is a refresh-token, get the auth-token from that.
+            # if str(auth_token).startswith("REFRESH_TOKEN:"):
+            #     _log.debug(f"Getting token from refresh_token {auth_token}")
+            #     # TODO How do we know if this targets sandbox or not?
+            #     # Now we assume it's sandbox
+            #     connect_zenodo.setup(True)
+            #     tokens = connect_zenodo.oauth_process() \
+            #         .get_tokens_from_refresh_token(auth_token.split("REFRESH_TOKEN:")[1])
+            #     _log.debug(f"Tokens: {str(tokens)}")
+            #     auth_token = tokens.get("access_token", "")
+            #     _log.debug(f"Auth Token: {auth_token}")
+            #     # TODO Update the secret (github/lab token is needed)
+
             if not auth_token:
                 raise DepositionUnauthorizedError("No valid auth token given for deposition platform")
             self.client = self.invenio_client_class(self.config,

src/hermes/commands/init/__init__.py

@@ -0,0 +1,2 @@
+# SPDX-FileCopyrightText: 2024 Forschungszentrum Jülich
+# SPDX-License-Identifier: Apache-2.0