From d30d739c7ae82b090370aba8deb13aefa69d4ac9 Mon Sep 17 00:00:00 2001
From: Guobin Zhao <53704568+sxm13@users.noreply.github.com>
Date: Mon, 16 Dec 2024 04:09:40 +0900
Subject: [PATCH] fix tools
---
contents/tools.md | 191 +++++++++++++++++++++++++++-------------------
index.html | 2 +-
2 files changed, 112 insertions(+), 81 deletions(-)
diff --git a/contents/tools.md b/contents/tools.md
index d0c7530..a7ff69f 100644
--- a/contents/tools.md
+++ b/contents/tools.md
@@ -1,81 +1,112 @@
-# G. Zhao's Development Portfolio
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+ G. Zhao's Development Portfolio
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+ G. Zhao's Development Portfolio
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-- [CoRE MOF 2024 Database](https://zenodo.org/records/14216942), [Tools](https://github.com/mtap-research/CoRE-MOF-Tools), [Web Application (alpha version)](https://c931-164-125-221-129.ngrok-free.app/) and [pypi](https://pypi.org/project/CoRE-MOF/).
-- [CoRE MOF 2019 Database v2](https://zenodo.org/records/14184621).
-- [PACMAN-charge](https://github.com/mtap-research/PACMAN-charge), [Web Application](https://pacman-charge-mtap.streamlit.app/) and [pypi](https://pypi.org/project/PACMAN-charge/).
-- [SESAMI pypi](https://pypi.org/project/SESAMI/).
-- [COF-H2-Project](https://github.com/sxm13/H2-COF-functionalization).
-- [GWP-Project](https://github.com/sxm13/GWP-project) and [Web Application](https://gwp-web-mtap-pnu.streamlit.app/).
-- [Xe-Kr-Separation-Project](https://github.com/sxm13/Xe-Kr-Separation-Project).
-
-# Useful Tools
-
-* Adsorption Software
- * [RASPA2](https://github.com/iRASPA/RASPA2)
- * [RASPA3](https://github.com/iRASPA/raspa3)
- * [gRASPA](https://github.com/snurr-group/gRASPA)
- * [Lammps-interface](https://github.com/peteboyd/lammps_interface/)
- * [RUPTURA](https://github.com/iRASPA/RUPTURA)
- * [pyAPEP](https://sebygaa.github.io/pyAPEP/build/html/index.html)
- * [PSA](https://github.com/PEESEgroup/PSA)
- * [pyIAST](https://github.com/CorySimon/pyIAST/)
- * [IAST++](https://sangwon91.github.io/IASTpp/)
- * [gaIAST](https://github.com/salrodgom/gaiast)
- * [Langmuir.jl](https://github.com/ClapeyronThermo/Langmuir.jl)
-
-* Partial Atomic Charges
- * [EQeq](https://github.com/numat/EQeq)
- * [m-CBAC](https://pubs.acs.org/doi/10.1021/acs.jpcc.0c01524)
- * [EQeq+C](https://pubs.acs.org/doi/10.1021/acs.jctc.5b00037)
- * [MPNN-Charge](https://github.com/SimonEnsemble/mpn_charges)
- * [PACMOF v1](https://github.com/snurr-group/pacmof) and [PACMOF v2](https://github.com/snurr-group/pacmof2)
- * [MEPO-ML](https://github.com/uowoolab/MEPO-ML)
- * [DDEC](https://sourceforge.net/projects/ddec/files/)
- * [REPEAT](https://github.com/uowoolab/REPEAT-Assigner)
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-* Texture Properties
- * [zeo++](http://www.zeoplusplus.org/)
- * [pygaps](https://pygaps.readthedocs.io/en/master/)
- * [pywindow](https://github.com/JelfsMaterialsGroup/pywindow)
- * [SAIEUS](http://www.nldft.com/download/)
- * [CrystalNets](https://progs.coudert.name/topology)
- * [Topology](http://rcsr.anu.edu.au/nets)
-
-* DFT Tools
- * [XPS](https://galore.readthedocs.io/en/latest/readme.html#documentation)
- * [Raman](https://github.com/raman-sc/VASP)
- * [VASPsol](https://github.com/henniggroup/VASPsol)
-
-* Cute Icons
- * [markdown emoji](https://www.webfx.com/tools/emoji-cheat-sheet/)
- * [Animated Icons](https://www.flaticon.com/animated-icons)
- * [Ion figs](https://thenounproject.com/)
-
-* Convert
- * [Unit Convert](https://www.colby.edu/chemistry/PChem/Hartree.html)
- * [Structure Format Convert](https://www.cheminfo.org/Chemistry/Cheminformatics/FormatConverter/index.html)
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-* Build Tools
- * [tobacco](https://github.com/tobacco-mofs/tobacco_3.0)
- * [pyCOFbulider](https://github.com/lipelopesoliveira/pyCOFBuilder)
- * [MOFexplorer](http://mausdin.github.io/MOFsite/mofPage.html)
- * [PROMAKE](https://github.com/Sangwon91/PORMAKE)
- * [pyCOSMOS: Compartmentalization](https://github.com/shivamrkparashar/pyCOSMOS)
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-* Nanoporous Materials and Adsorption Database
- * [QMOF](https://github.com/arosen93/QMOF)
- * [CSD MOF Set](https://www.ccdc.cam.ac.uk/support-and-resources/downloads/)
- * [ARC-MOF](https://zenodo.org/records/13891643)
- * [CURATED COF](https://github.com/danieleongari/CURATED-COFs)
- * [CoRE COF](https://github.com/core-cof/CoRE-COF-Database)
- * [IZA database](https://www.iza-structure.org/databases/)
- * [NIST Adsorption Data](https://adsorption.nist.gov/index.php#home)
- * [HyMarc Adsorption Data](https://datahub.hymarc.org/dataset)
- * [Acentric_Factors](https://www.kaylaiacovino.com/Petrology_Tools/Critical_Constants_and_Acentric_Factors.htm)
-
-* API
- * [Springer, Xml](https://dev.springernature.com/)
- * [Wiley, PDF](https://onlinelibrary.wiley.com/library-info/resources/text-and-datamining)
- * [Elsevier, Xml](https://dev.elsevier.com/)
- * [RSC, Html](https://developer.rsc.org/create-an-api-key)
- * [ACS, Xml](https://www.acs.org/events/all-events/rapid-delivery-of-api-enables-accelerated-ind-application-challenges-and-solutions.html)
\ No newline at end of file
+ Useful Tools
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+ - Adsorption Software
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+ - Partial Atomic Charges
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+ - Texture Properties
+
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+ - DFT Tools
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+ - Cute Icons
+
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+ - Convert
+
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+ - Build Tools
+
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+ - Nanoporous Materials and Adsorption Database
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+ - API
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diff --git a/index.html b/index.html
index c8c848b..413a10d 100644
--- a/index.html
+++ b/index.html
@@ -154,7 +154,7 @@ AWARDS