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environment.yml
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environment.yml
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name: tf_gpu
channels:
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- _tflow_select=2.1.0=gpu
- absl-py=0.9.0=py37_0
- astor=0.8.0=py37_0
- blas=1.0=mkl
- c-ares=1.15.0=h7b6447c_1001
- ca-certificates=2020.1.1=0
- certifi=2019.11.28=py37_0
- cudatoolkit=10.0.130=0
- cudnn=7.6.5=cuda10.0_0
- cupti=10.0.130=0
- gast=0.2.2=py37_0
- google-pasta=0.1.8=py_0
- grpcio=1.16.1=py37hf8bcb03_1
- h5py=2.10.0=py37h7918eee_0
- hdf5=1.10.4=hb1b8bf9_0
- intel-openmp=2020.0=166
- keras-applications=1.0.8=py_0
- keras-preprocessing=1.1.0=py_1
- ld_impl_linux-64=2.33.1=h53a641e_7
- libedit=3.1.20181209=hc058e9b_0
- libffi=3.2.1=hd88cf55_4
- libgcc-ng=9.1.0=hdf63c60_0
- libgfortran-ng=7.3.0=hdf63c60_0
- libprotobuf=3.11.3=hd408876_0
- libstdcxx-ng=9.1.0=hdf63c60_0
- markdown=3.1.1=py37_0
- mkl=2020.0=166
- mkl-service=2.3.0=py37he904b0f_0
- mkl_fft=1.0.15=py37ha843d7b_0
- mkl_random=1.1.0=py37hd6b4f25_0
- ncurses=6.1=he6710b0_1
- numpy=1.18.1=py37h4f9e942_0
- numpy-base=1.18.1=py37hde5b4d6_1
- openssl=1.1.1d=h7b6447c_4
- opt_einsum=3.1.0=py_0
- pip=20.0.2=py37_1
- protobuf=3.11.3=py37he6710b0_0
- python=3.7.6=h0371630_2
- readline=7.0=h7b6447c_5
- scipy=1.4.1=py37h0b6359f_0
- setuptools=45.2.0=py37_0
- six=1.14.0=py37_0
- sqlite=3.31.1=h7b6447c_0
- tensorboard=2.0.0=pyhb38c66f_1
- tensorflow=2.0.0=gpu_py37h768510d_0
- tensorflow-base=2.0.0=gpu_py37h0ec5d1f_0
- tensorflow-estimator=2.0.0=pyh2649769_0
- tensorflow-gpu=2.0.0=h0d30ee6_0
- termcolor=1.1.0=py37_1
- tk=8.6.8=hbc83047_0
- werkzeug=0.16.1=py_0
- wheel=0.34.2=py37_0
- wrapt=1.11.2=py37h7b6447c_0
- xz=5.2.4=h14c3975_4
- zlib=1.2.11=h7b6447c_3
- pip:
- adjusttext==0.7.3
- anndata==0.7.1
- attrs==19.3.0
- backcall==0.1.0
- bleach==3.1.1
- click==7.1.2
- cloudpickle==1.3.0
- cycler==0.10.0
- decorator==4.4.1
- defusedxml==0.6.0
- entrypoints==0.3
- fa2==0.3.5
- get-version==2.1
- igraph==0.1.11
- importlib-metadata==1.5.0
- ipykernel==5.1.4
- ipython==7.12.0
- ipython-genutils==0.2.0
- jedi==0.16.0
- jinja2==2.11.1
- joblib==0.14.1
- json5==0.9.1
- jsonschema==3.2.0
- jupyter-client==5.3.4
- jupyter-core==4.6.3
- jupyterlab==1.2.6
- jupyterlab-server==1.0.6
- keras==2.3.1
- kiwisolver==1.1.0
- legacy-api-wrap==1.2
- llvmlite==0.31.0
- loompy==3.0.6
- markupsafe==1.1.1
- matplotlib==3.1.3
- mistune==0.8.4
- natsort==7.0.1
- nbconvert==5.6.1
- nbformat==5.0.4
- networkx==2.4
- notebook==6.0.3
- numba==0.48.0
- numexpr==2.7.1
- numpy-groupies==0+unknown
- packaging==20.1
- pandas==1.0.1
- pandocfilters==1.4.2
- parso==0.6.1
- patsy==0.5.1
- pexpect==4.8.0
- pickleshare==0.7.5
- prometheus-client==0.7.1
- prompt-toolkit==3.0.3
- ptyprocess==0.6.0
- pygments==2.5.2
- pyparsing==2.4.6
- pyrsistent==0.15.7
- python-dateutil==2.8.1
- pytz==2019.3
- pyyaml==5.3
- pyzmq==18.1.1
- scanpy==1.4.5.1
- scikit-learn==0.22.1
- scvelo==0.1.25
- seaborn==0.10.0
- send2trash==1.5.0
- setuptools-scm==3.5.0
- statsmodels==0.11.0
- tables==3.6.1
- terminado==0.8.3
- testpath==0.4.4
- tornado==6.0.3
- tqdm==4.42.1
- traitlets==4.3.3
- umap-learn==0.3.10
- wcwidth==0.1.8
- webencodings==0.5.1
- zipp==2.2.0
prefix: /home/icb/harshita.agarwala/miniconda3/envs/tf_gpu