diff --git a/modules/hash_demulti/demuxem.nf b/modules/hash_demulti/demuxem.nf index 65b5033..71493e7 100644 --- a/modules/hash_demulti/demuxem.nf +++ b/modules/hash_demulti/demuxem.nf @@ -5,7 +5,7 @@ process demuxem{ publishDir "$projectDir/$params.outdir/$sampleId/$params.mode/hash_demulti/demuxem", mode:'copy' label 'small_mem' - conda "python bioconda::pegasuspy pandas scanpy demuxEM" + conda "bioconda::pegasuspy bioconda::scanpy bioconda::demuxEM" input: tuple val(sampleId), path(raw_hto_matrix_dir, stageAs: "hto_data_${params.hto_matrix_demuxem}"),