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Error: unexpected symbol in "Rscript plotProtein.R" #1

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ghost opened this issue Oct 15, 2018 · 2 comments
Open

Error: unexpected symbol in "Rscript plotProtein.R" #1

ghost opened this issue Oct 15, 2018 · 2 comments

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@ghost
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ghost commented Oct 15, 2018

> Rscript plotProtein.R -m psen1_mutation_file.txt -a psen1_architecture_file.txt -p psen1_post_translation_file.txt -l 463
Error: unexpected symbol in "Rscript plotProtein.R"

I ran install.packages("optparse")

@ghost
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ghost commented Oct 15, 2018

the " symbols in line 85 in plotProtein.R look weird

@tycheleturner
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tycheleturner commented Oct 17, 2018

Hi, Thanks for checking out plot protein. I just ran the following

git clone https://github.com/tycheleturner/plot-protein.git

cd plot-protein/

Rscript plotProtein.R -m psen1_mutation_file.txt -a psen1_architecture_file.txt -p psen1_post_translation_file.txt -l 463
null device
          1

and got no errors. I'm using R version 3.4.3

Could you try again as above? Thanks.

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