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debug macos tests

debug macos tests #400

Workflow file for this run

name: Tests Fast Python
on:
push:
branches: [main, release]
pull_request:
types: [opened, synchronize, reopened]
workflow_dispatch:
jobs:
Linter:
runs-on: ${{ matrix.os }}
strategy:
matrix:
python-version: ["3.11"]
os: [ubuntu-latest]
steps:
- uses: actions/checkout@v3
with:
submodules: true
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
pip install bandit pre-commit
- name: pre-commit validation
run: pre-commit run --all
- name: Security checks
run: |
bandit -r src/synthcity/*
Library:
needs: [Linter]
runs-on: ${{ matrix.os }}
strategy:
matrix:
python-version: ["3.11"]
os: [macos-13]
steps:
- uses: actions/checkout@v3
with:
submodules: true
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
cache: "pip" # caching pip dependencies
- name: Install MacOS dependencies
run: |
brew install libomp
if: ${{ contains(matrix.os, 'macos') }}
- name: Set libomp environment variables (macOS only)
run: |
export LDFLAGS="-L/opt/homebrew/opt/libomp/lib"
export CPPFLAGS="-I/opt/homebrew/opt/libomp/include"
export DYLD_LIBRARY_PATH="/opt/homebrew/opt/libomp/lib:$DYLD_LIBRARY_PATH"
echo "DYLD_LIBRARY_PATH set to $DYLD_LIBRARY_PATH"
if: ${{ contains(matrix.os, 'macos') }}
- name: Install dependencies
run: |
python -m pip install -U pip
pip install -r prereq.txt
pip install pytest-timeout
if [[ $(uname) == 'Darwin' ]]; then
pip install xgboost==1.7.6
fi
- name: Set environment variables for MNIST
run: echo "MNIST_DATA_DIR=${{ github.workspace }}/mnist_data" >> $GITHUB_ENV
- name: Dump GitHub Action environment
run: |
echo "OS: $(uname -a)"
python --version
pip freeze
- name: Test Core
run: |
pip install .[testing]
pip freeze
pytest -vvvsx --timeout=300 --timeout-method=thread -m "not slow" --durations=50
- name: Test GOGGLE
run: |
pip install .[testing,goggle]
pytest -vvvsx -m "not slow" -k goggle