.travis.yml

# use the minimal travis environment since we test in conda
language: minimal

os:
  - osx
  - linux

env:
  global:
    - CC_TEST_REPORTER_ID=951f438ac8a0fa93801ff0bf69922df59fe03800bf7ea8ab77a3c26cda444979
  jobs:
    - PYTHON_VERSION: "3.6"
#    - PYTHON_VERSION: "3.7"
#    - PYTHON_VERSION: "3.8"

before_install:
  # install miniconda
  - if [[ "$TRAVIS_OS_NAME" == "linux" ]]; then
      wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh;
    else
      wget https://repo.continuum.io/miniconda/Miniconda3-latest-MacOSX-x86_64.sh -O miniconda.sh;
    fi
  - chmod +x miniconda.sh
  - ./miniconda.sh -b -p $HOME/miniconda -f
  - export PATH=$HOME/miniconda/bin:$PATH
  - conda config --set always_yes yes

install:
  # python version is specified in environment.yml
  - conda env create -n scepia python=$PYTHON_VERSION -f environment.yml
  - source activate scepia
  - python setup.py develop
  - python setup.py build

before_script:
  # install codeclimate test coverage
  - if [[ "$TRAVIS_OS_NAME" == "linux" ]]; then
        wget -O cc-test-reporter https://codeclimate.com/downloads/test-reporter/test-reporter-latest-linux-amd64;
    else
        wget -O cc-test-reporter https://codeclimate.com/downloads/test-reporter/test-reporter-latest-darwin-amd64;
    fi
  - chmod +x ./cc-test-reporter
  - ./cc-test-reporter before-build

script:
  - black --check setup.py scepia/ tests/
  - flake8 setup.py scepia/ tests/
  - pytest -v --disable-pytest-warnings --cov=genomepy --cov-report=xml tests/

# Pipe the coverage data to Code Climate
after_script:
  - if [[ "$TRAVIS_OS_NAME" == "linux" ]]; then ./cc-test-reporter after-build -t coverage.py --exit-code $TRAVIS_TEST_RESULT; fi