From 3e31a3decc482763443e4e06a4729e39527faecf Mon Sep 17 00:00:00 2001
From: "Aviv A. Rosenberg" <aviv.rosenberg@gmail.com>
Date: Thu, 6 May 2021 17:01:17 +0300
Subject: [PATCH] Update workflow

Try to fix the env activation
---
 .github/workflows/main.yml | 10 +++++-----
 1 file changed, 5 insertions(+), 5 deletions(-)

diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
index ada30c1..6dc4329 100644
--- a/.github/workflows/main.yml
+++ b/.github/workflows/main.yml
@@ -40,9 +40,9 @@ jobs:
           conda-channels: conda-forge # optional, default is 
 
       - name: Install deps
-        run: |
-            conda env update -f environment.yml -n proteins
-            conda activate proteins
-
+        run: conda env update -f environment.yml -n proteins
+        
       - name: Run tests
-        run: pytest
+        run: |
+          source activate proteins
+          pytest