From 01d1804bd59db06b3c28d2f3c70a8b9de69839f5 Mon Sep 17 00:00:00 2001 From: Levi Waldron Date: Thu, 19 Oct 2023 11:00:05 -0400 Subject: [PATCH] add bugsigdb-related links --- README.md | 14 ++++++++++++++ 1 file changed, 14 insertions(+) diff --git a/README.md b/README.md index 921e97e..ffe1c6c 100644 --- a/README.md +++ b/README.md @@ -49,3 +49,17 @@ Eric Franzosa, Karthik Raman, Vincent Carey, Jennifer B. Dowd, Heidi E. Jones, Sean Davis, Nicola Segata, Curtis Huttenhower, Levi Waldron (2023) BugSigDB captures patterns of differential abundance across a broad range of host-associated microbial signatures. *Nature Biotechnology*, doi: [10.1038/s41587-023-01872-y](https://doi.org/10.1038/s41587-023-01872-y). + +# bugsigdb-related links + +* [bugsigdb.org](https://bugsigdb.org): A Comprehensive Database of Published Microbial Signatures +* [BugSigDB issue tracker](https://github.com/waldronlab/BugSigDB/issues): Report bugs or feature requests for bugsigdb.org +* [BugSigDBExports](https://github.com/waldronlab/BugSigDBExports): Hourly data exports of bugsigdb.org +* [Stable data releases](https://zenodo.org/records/6468009): Periodic manually-reviewed stable data releses on Zenodo +* [bugsigdbr](https://bioconductor.org/packages/bugsigdbr/): R/Bioconductor access to published microbial signatures from BugSigDB +* [Curation issues](https://github.com/waldronlab/BugSigDBcuration/issues): Report curation issues, requests studies to be added +* [bugSigSimple](https://github.com/waldronlab/bugSigSimple): Simple analyses of BugSigDB data in R +* [BugSigDBStats](https://github.com/waldronlab/BugSigDBStats): Statistics and trends of BugSigDB +* [BugSigDBPaper](https://github.com/waldronlab/BugSigDBPaper): Reproduces analyses of the [Nature Biotechnology publication](https://www.nature.com/articles/s41587-023-01872-y) +* [community-bioc Slack Team](https://slack.bioconductor.org/): Join #bugsigdb channel +