From 7c6c27ae5345a258f6624e7dd6e91144287378e1 Mon Sep 17 00:00:00 2001 From: sdgamboa <53412049+sdgamboa@users.noreply.github.com> Date: Tue, 23 Jul 2024 20:12:20 +0000 Subject: [PATCH] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20waldronl?= =?UTF-8?q?ab/taxPPro@7a9b74cfc1224df4c9b25e1560abe8bcbdcc66c6=20?= =?UTF-8?q?=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- 404.html | 14 +- articles/add_singletons.html | 119 ++++++------ articles/figure_example.html | 152 ++++++++-------- articles/index.html | 14 +- articles/internal_nodes.html | 119 ++++++------ articles/nsti.html | 96 +++++----- .../figure-html/unnamed-chunk-5-1.png | Bin 20448 -> 20230 bytes .../figure-html/unnamed-chunk-6-1.png | Bin 18325 -> 18198 bytes articles/smaller_example.html | 170 +++++++++--------- articles/taxPPro.html | 80 ++++----- articles/uncertainty_binary.html | 119 ++++++------ articles/uncertainty_multistate.html | 119 ++++++------ authors.html | 20 +-- index.html | 14 +- news/index.html | 16 +- pkgdown.yml | 21 ++- reference/addRankPrefix.html | 26 +-- reference/classif2Table.html | 26 +-- reference/completeBinaryData.html | 24 +-- reference/conf2Fct.html | 24 +-- reference/filterData.html | 24 +-- reference/filterDataDiscrete.html | 24 +-- reference/filterDataNumeric.html | 24 +-- reference/freq2Scores.html | 24 +-- reference/freq2Scores2.html | 24 +-- reference/getDataReady.html | 24 +-- reference/getNsti.html | 28 +-- reference/getSetWithIDs.html | 24 +-- reference/getSetWithoutIDs.html | 26 +-- reference/index.html | 16 +- reference/ltp.html | 26 +-- reference/nsti2Freq.html | 24 +-- reference/roundDec.html | 24 +-- reference/scores2Freq.html | 24 +-- sitemap.xml | 128 ++++--------- 35 files changed, 775 insertions(+), 862 deletions(-) diff --git a/404.html b/404.html index 2b538cf..7cd2172 100644 --- a/404.html +++ b/404.html @@ -18,7 +18,7 @@ - +
- +
@@ -121,16 +121,16 @@

Page not found (404)

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/articles/add_singletons.html b/articles/add_singletons.html index d36c98a..6254c9b 100644 --- a/articles/add_singletons.html +++ b/articles/add_singletons.html @@ -12,14 +12,13 @@ - - +
- +
@@ -102,7 +101,7 @@

add_singletons

- Source: vignettes/articles/add_singletons.Rmd + Source: vignettes/articles/add_singletons.Rmd
@@ -229,99 +228,97 @@

Session information
 sessioninfo::session_info()
-#> - Session info ---------------------------------------------------------------
+#> ─ Session info ───────────────────────────────────────────────────────────────
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-#>  version  R version 4.4.0 (2024-04-24)
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-#> ------------------------------------------------------------------------------

+#> ──────────────────────────────────────────────────────────────────────────────
+ @@ -334,16 +331,16 @@

Session information

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/articles/figure_example.html b/articles/figure_example.html index 6bfec41..0f3a981 100644 --- a/articles/figure_example.html +++ b/articles/figure_example.html @@ -12,14 +12,13 @@ - - +
- +
@@ -102,7 +101,7 @@

Example numeric

- Source: vignettes/articles/figure_example.Rmd + Source: vignettes/articles/figure_example.Rmd
@@ -208,120 +207,119 @@

Session info
 sessioninfo::session_info()
-#> - Session info ---------------------------------------------------------------
+#> ─ Session info ───────────────────────────────────────────────────────────────
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-#>  version  R version 4.4.0 (2024-04-24)
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Session info

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Site built with pkgdown 2.0.9.

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Site built with pkgdown 2.1.0.

- - + + diff --git a/articles/index.html b/articles/index.html index c52a1db..b840b33 100644 --- a/articles/index.html +++ b/articles/index.html @@ -3,7 +3,7 @@ - +
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@@ -107,15 +107,15 @@

All vignettes

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Site built with pkgdown 2.0.9.

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Site built with pkgdown 2.1.0.

- - + + diff --git a/articles/internal_nodes.html b/articles/internal_nodes.html index b48cf6a..5ffe4a4 100644 --- a/articles/internal_nodes.html +++ b/articles/internal_nodes.html @@ -12,14 +12,13 @@ - - +
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@@ -102,7 +101,7 @@

internal_nodes

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@@ -349,99 +348,97 @@

Session information
 sessioninfo::session_info()
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Session information

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- +
@@ -103,7 +102,7 @@

weighted Nearest Sequenced Taxon Index (wNSTI)

- Source: vignettes/articles/nsti.Rmd + Source: vignettes/articles/nsti.Rmd
@@ -161,90 +160,87 @@

System information
 sessioninfo::session_info()
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+#> ──────────────────────────────────────────────────────────────────────────────
+ @@ -257,16 +253,16 @@

System information

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Site built with pkgdown 2.0.9.

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Site built with pkgdown 2.1.0.

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- +
@@ -102,7 +101,7 @@

Examples with a single annotation

- Source: vignettes/articles/smaller_example.Rmd + Source: vignettes/articles/smaller_example.Rmd
@@ -456,132 +455,131 @@

Session info
 sessioninfo::session_info()
-#> - Session info ---------------------------------------------------------------
+#> ─ Session info ───────────────────────────────────────────────────────────────
 #>  setting  value
-#>  version  R version 4.4.0 (2024-04-24)
+#>  version  R version 4.4.1 (2024-06-14)
 #>  os       Ubuntu 22.04.4 LTS
 #>  system   x86_64, linux-gnu
 #>  ui       X11
 #>  language en
-#>  collate  C
-#>  ctype    C
+#>  collate  en_US.UTF-8
+#>  ctype    en_US.UTF-8
 #>  tz       Etc/UTC
-#>  date     2024-05-09
-#>  pandoc   3.1.13 @ /usr/bin/ (via rmarkdown)
+#>  date     2024-07-23
+#>  pandoc   3.2 @ /usr/bin/ (via rmarkdown)
 #> 
-#> - Packages -------------------------------------------------------------------
+#> ─ Packages ───────────────────────────────────────────────────────────────────
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+#>  abind               1.4-5      2016-07-21 [1] RSPM (R 4.4.0)
 #>  ape               * 5.8        2024-04-11 [1] RSPM (R 4.4.0)
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-#>  broom               1.0.5      2023-06-09 [1] CRAN (R 4.4.0)
+#>  aplot               0.2.3      2024-06-17 [1] RSPM (R 4.4.0)
+#>  backports           1.5.0      2024-05-23 [1] RSPM (R 4.4.0)
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 #>  bslib               0.7.0      2024-03-29 [1] RSPM (R 4.4.0)
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-#>  cowplot             1.1.3      2024-01-22 [1] CRAN (R 4.4.0)
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+#>  clusterGeneration   1.3.8      2023-08-16 [1] RSPM (R 4.4.0)
+#>  coda                0.19-4.1   2024-01-31 [1] RSPM (R 4.4.0)
+#>  codetools           0.2-20     2024-03-31 [2] CRAN (R 4.4.1)
+#>  colorspace          2.1-0      2023-01-23 [1] RSPM (R 4.4.0)
+#>  combinat            0.0-8      2012-10-29 [1] RSPM (R 4.4.0)
+#>  cowplot             1.1.3      2024-01-22 [1] RSPM (R 4.4.0)
+#>  DEoptim             2.2-8      2022-11-11 [1] RSPM (R 4.4.0)
 #>  desc                1.4.3      2023-12-10 [1] RSPM (R 4.4.0)
-#>  digest              0.6.35     2024-03-11 [1] RSPM (R 4.4.0)
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-#>  expm                0.999-9    2024-01-11 [1] CRAN (R 4.4.0)
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Session info

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Site built with pkgdown 2.1.0.

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@@ -102,7 +101,7 @@

taxPPro

- Source: vignettes/taxPPro.Rmd + Source: vignettes/taxPPro.Rmd
@@ -134,79 +133,76 @@

Session information
 sessioninfo::session_info()
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Session information

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- +
@@ -102,7 +101,7 @@

Uncertainty in tips with binary attributes

- Source: vignettes/articles/uncertainty_binary.Rmd + Source: vignettes/articles/uncertainty_binary.Rmd
@@ -221,99 +220,97 @@

Session information
 sessioninfo::session_info()
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-#> ------------------------------------------------------------------------------

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+ @@ -326,16 +323,16 @@

Session information

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/articles/uncertainty_multistate.html b/articles/uncertainty_multistate.html index 3c86994..2b1b9a2 100644 --- a/articles/uncertainty_multistate.html +++ b/articles/uncertainty_multistate.html @@ -12,14 +12,13 @@ - - +
- +
@@ -103,7 +102,7 @@

Uncertainty in tips with multistate(-intersection) annotations

- Source: vignettes/articles/uncertainty_multistate.Rmd + Source: vignettes/articles/uncertainty_multistate.Rmd
@@ -227,99 +226,97 @@

Session information
 sessioninfo::session_info()
-#> - Session info ---------------------------------------------------------------
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-#> ------------------------------------------------------------------------------

+#> ──────────────────────────────────────────────────────────────────────────────
+ @@ -332,16 +329,16 @@

Session information

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Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/authors.html b/authors.html index 9aa6c90..74686fa 100644 --- a/authors.html +++ b/authors.html @@ -3,7 +3,7 @@ - +
- +
@@ -78,7 +78,7 @@

Authors and Citation

- +
-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/index.html b/index.html index 13c8fdd..7d7478f 100644 --- a/index.html +++ b/index.html @@ -19,7 +19,7 @@ - +
- +
@@ -158,16 +158,16 @@

Developers

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/news/index.html b/news/index.html index e764ea3..2ffd88e 100644 --- a/news/index.html +++ b/news/index.html @@ -3,7 +3,7 @@ - +
- +

Changelog

- Source: NEWS.md + Source: NEWS.md
@@ -96,15 +96,15 @@

taxPPro 1.0.0
-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/pkgdown.yml b/pkgdown.yml index 4faa379..9a2eca8 100644 --- a/pkgdown.yml +++ b/pkgdown.yml @@ -1,17 +1,16 @@ -pandoc: 3.1.13 -pkgdown: 2.0.9 +pandoc: '3.2' +pkgdown: 2.1.0 pkgdown_sha: ~ articles: - add_singletons: add_singletons.html - figure_example: figure_example.html - internal_nodes: internal_nodes.html - nsti: nsti.html - smaller_example: smaller_example.html + articles/add_singletons: add_singletons.html + articles/figure_example: figure_example.html + articles/internal_nodes: internal_nodes.html + articles/nsti: nsti.html + articles/smaller_example: smaller_example.html taxPPro: taxPPro.html - uncertainty_binary: uncertainty_binary.html - uncertainty_multistate: uncertainty_multistate.html -last_built: 2024-05-09T15:31Z + articles/uncertainty_binary: uncertainty_binary.html + articles/uncertainty_multistate: uncertainty_multistate.html +last_built: 2024-07-23T20:08Z urls: reference: https://waldronlab.io/taxPPro/reference article: https://waldronlab.io/taxPPro/articles - diff --git a/reference/addRankPrefix.html b/reference/addRankPrefix.html index 0f5ec91..6646938 100644 --- a/reference/addRankPrefix.html +++ b/reference/addRankPrefix.html @@ -3,7 +3,7 @@ - +
- +

Add rank prefix to NCBI_ID

- Source: R/utils.R + Source: R/utils.R
@@ -89,19 +89,19 @@

Add rank prefix to NCBI_ID

Arguments

-
id
+ + +
id

A character vector of NCBI IDs (taxids).

-
rank
+
rank

A character vector of ranks

Value

- - -

A character vector of IDs with prefix.

+

A character vector of IDs with prefix.

@@ -116,15 +116,15 @@

Value

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/reference/classif2Table.html b/reference/classif2Table.html index 848c3ec..4418ea9 100644 --- a/reference/classif2Table.html +++ b/reference/classif2Table.html @@ -4,7 +4,7 @@ - +
- +

Taxize classification to data frame

- Source: R/utils.R + Source: R/utils.R
@@ -91,19 +91,19 @@

Taxize classification to data frame

Arguments

-
x
+ + +
x

Output from the `taxize::classification` function.

-
ranks
+
ranks

Ranks to be selected. Default is given by `.validRanks()`.

Value

- - -

A data frame.

+

A data frame.

@@ -118,15 +118,15 @@

Value

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/reference/completeBinaryData.html b/reference/completeBinaryData.html index e0e5922..da8b2cb 100644 --- a/reference/completeBinaryData.html +++ b/reference/completeBinaryData.html @@ -4,7 +4,7 @@ - +
- +

Complete binary data

- Source: R/taxPPro.R + Source: R/taxPPro.R
@@ -91,15 +91,15 @@

Complete binary data

Arguments

-
tbl
+ + +
tbl

A data.frame.

Value

- - -

A data.frame.

+

A data.frame.

@@ -114,15 +114,15 @@

Value

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/reference/conf2Fct.html b/reference/conf2Fct.html index 2017587..6a6a34f 100644 --- a/reference/conf2Fct.html +++ b/reference/conf2Fct.html @@ -4,7 +4,7 @@ - +
- +

Confidence in curation to factor

- Source: R/utils.R + Source: R/utils.R
@@ -91,15 +91,15 @@

Confidence in curation to factor

Arguments

-
x
+ + +
x

A character vector.

Value

- - -

A factor.

+

A factor.

@@ -114,15 +114,15 @@

Value

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/reference/filterData.html b/reference/filterData.html index daeaf3c..cc87f86 100644 --- a/reference/filterData.html +++ b/reference/filterData.html @@ -4,7 +4,7 @@ - +
- +

Filter data

- Source: R/taxPPro.R + Source: R/taxPPro.R
@@ -91,15 +91,15 @@

Filter data

Arguments

-
tbl
+ + +
tbl

A data.frame.

Value

- - -

A data.frame.

+

A data.frame.

@@ -114,15 +114,15 @@

Value

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/reference/filterDataDiscrete.html b/reference/filterDataDiscrete.html index b180815..4374e00 100644 --- a/reference/filterDataDiscrete.html +++ b/reference/filterDataDiscrete.html @@ -5,7 +5,7 @@ - +
- +

Filter data with discrete attributes

- Source: R/taxPPro.R + Source: R/taxPPro.R
@@ -93,15 +93,15 @@

Filter data with discrete attributes

Arguments

-
tbl
+ + +
tbl

A data.frame imported with bugphyzz::physiologies

Value

- - -

A data.frame.

+

A data.frame.

@@ -116,15 +116,15 @@

Value

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/reference/filterDataNumeric.html b/reference/filterDataNumeric.html index fd2a055..14c2e27 100644 --- a/reference/filterDataNumeric.html +++ b/reference/filterDataNumeric.html @@ -6,7 +6,7 @@ - +
- +

Filter data with numeric attributes

- Source: R/taxPPro.R + Source: R/taxPPro.R
@@ -95,15 +95,15 @@

Filter data with numeric attributes

Arguments

-
tbl
+ + +
tbl

A data.frame imported with bugphyzz::physiologies

Value

- - -

A data.frame.

+

A data.frame.

@@ -118,15 +118,15 @@

Value

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/reference/freq2Scores.html b/reference/freq2Scores.html index 8f760de..da01fa2 100644 --- a/reference/freq2Scores.html +++ b/reference/freq2Scores.html @@ -5,7 +5,7 @@ - +
- +

Frequency to scores

- Source: R/utils.R + Source: R/utils.R
@@ -93,15 +93,15 @@

Frequency to scores

Arguments

-
x
+ + +
x

A character vector.

Value

- - -

A numeric vector.

+

A numeric vector.

@@ -116,15 +116,15 @@

Value

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/reference/freq2Scores2.html b/reference/freq2Scores2.html index 20e89c5..04315ff 100644 --- a/reference/freq2Scores2.html +++ b/reference/freq2Scores2.html @@ -6,7 +6,7 @@ - +
- +

Frequency to scores 2

- Source: R/utils.R + Source: R/utils.R
@@ -95,15 +95,15 @@

Frequency to scores 2

Arguments

-
x
+ + +
x

A character vector.

Value

- - -

A numeric vector.

+

A numeric vector.

@@ -118,15 +118,15 @@

Value

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/reference/getDataReady.html b/reference/getDataReady.html index 1e1a0f2..4991717 100644 --- a/reference/getDataReady.html +++ b/reference/getDataReady.html @@ -3,7 +3,7 @@ - +
- +

Get data ready for propagation

- Source: R/taxPPro.R + Source: R/taxPPro.R
@@ -89,15 +89,15 @@

Get data ready for propagation

Arguments

-
tbl
+ + +
tbl

A data.frame.

Value

- - -

A data.frame.

+

A data.frame.

@@ -112,15 +112,15 @@

Value

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/reference/getNsti.html b/reference/getNsti.html index d05ebef..083e2a6 100644 --- a/reference/getNsti.html +++ b/reference/getNsti.html @@ -5,7 +5,7 @@ - +
- +

Get NSTI

- Source: R/trees.R + Source: R/trees.R
@@ -93,24 +93,24 @@

Get NSTI

Arguments

-
tree
+ + +
tree

A phylo object

-
annotated_tip_labels
+
annotated_tip_labels

A character vector with the names of the tips

-
nodes
+
nodes

A character vector with the names of nodes in the tree that are annotated.

Value

- - -

A data.frame with two columns: tip_label and nsti.

+

A data.frame with two columns: tip_label and nsti.

@@ -125,15 +125,15 @@

Value

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/reference/getSetWithIDs.html b/reference/getSetWithIDs.html index adff8e8..3c1045e 100644 --- a/reference/getSetWithIDs.html +++ b/reference/getSetWithIDs.html @@ -3,7 +3,7 @@ - +
- +

Get set with IDs

- Source: R/taxPPro.R + Source: R/taxPPro.R
@@ -89,15 +89,15 @@

Get set with IDs

Arguments

-
tbl
+ + +
tbl

A data.frame.

Value

- - -

A data.frame.

+

A data.frame.

@@ -112,15 +112,15 @@

Value

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/reference/getSetWithoutIDs.html b/reference/getSetWithoutIDs.html index b409508..7edad83 100644 --- a/reference/getSetWithoutIDs.html +++ b/reference/getSetWithoutIDs.html @@ -3,7 +3,7 @@ - +
- +

Get set without IDs

- Source: R/taxPPro.R + Source: R/taxPPro.R
@@ -89,19 +89,19 @@

Get set without IDs

Arguments

-
tbl
+ + +
tbl

A data.frame.

-
set_with_ids
+
set_with_ids

A data.frame

Value

- - -

A data.frame.

+

A data.frame.

@@ -116,15 +116,15 @@

Value

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/reference/index.html b/reference/index.html index 81f3046..66800a1 100644 --- a/reference/index.html +++ b/reference/index.html @@ -1,9 +1,9 @@ -Function reference • taxPProPackage index • taxPPro - +
- +
@@ -162,15 +162,15 @@

All functions
-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/reference/ltp.html b/reference/ltp.html index b763ebc..49e7ca2 100644 --- a/reference/ltp.html +++ b/reference/ltp.html @@ -4,7 +4,7 @@ - +
- +

Get living tree project (LTP) tree and data

- Source: R/trees.R + Source: R/trees.R
@@ -91,21 +91,21 @@

Get living tree project (LTP) tree and data

Arguments

-
remove_gn_nodes
+ + +
remove_gn_nodes

Remove rows from node_data with genus taxids. Default is TRUE, which removes them. These are already in tip_data.

-
node_names
+
node_names

Add names to unnamed nodes (n + node number). This will only be in the tree (not in node_data).

Value

- - -

A list with a the LTP tree (phylo), tips and node data (data.frames), +

A list with a the LTP tree (phylo), tips and node data (data.frames), and the names of the genera added to the original tree (character vector). .

@@ -122,15 +122,15 @@

Value

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/reference/nsti2Freq.html b/reference/nsti2Freq.html index d28bbab..8dc138e 100644 --- a/reference/nsti2Freq.html +++ b/reference/nsti2Freq.html @@ -3,7 +3,7 @@ - +
- +

NSTI to Frequency

- Source: R/utils.R + Source: R/utils.R
@@ -89,15 +89,15 @@

NSTI to Frequency

Arguments

-
x
+ + +
x

A numeric vectir of nsti values

Value

- - -

A character vector of frequency keywords.

+

A character vector of frequency keywords.

@@ -112,15 +112,15 @@

Value

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/reference/roundDec.html b/reference/roundDec.html index e9bfc10..3721f9a 100644 --- a/reference/roundDec.html +++ b/reference/roundDec.html @@ -4,7 +4,7 @@ - +
- +

Round up to nearest decimal

- Source: R/utils.R + Source: R/utils.R
@@ -91,15 +91,15 @@

Round up to nearest decimal

Arguments

-
A
+ + +
A

character vector (of attributes).

Value

- - -

A double.

+

A double.

@@ -114,15 +114,15 @@

Value

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/reference/scores2Freq.html b/reference/scores2Freq.html index ce1e19c..e9f1d48 100644 --- a/reference/scores2Freq.html +++ b/reference/scores2Freq.html @@ -4,7 +4,7 @@ - +
- +

Scores to frequency

- Source: R/utils.R + Source: R/utils.R
@@ -91,15 +91,15 @@

Scores to frequency

Arguments

-
x
+ + +
x

A numeric vector.

Value

- - -

A character vector.

+

A character vector.

@@ -114,15 +114,15 @@

Value

-

Site built with pkgdown 2.0.9.

+

Site built with pkgdown 2.1.0.

- - + + diff --git a/sitemap.xml b/sitemap.xml index 5c25ae7..adc5abb 100644 --- a/sitemap.xml +++ b/sitemap.xml @@ -1,96 +1,34 @@ - - - - https://waldronlab.io/taxPPro/404.html - - - https://waldronlab.io/taxPPro/articles/add_singletons.html - - - https://waldronlab.io/taxPPro/articles/figure_example.html - - - https://waldronlab.io/taxPPro/articles/index.html - - - https://waldronlab.io/taxPPro/articles/internal_nodes.html - - - https://waldronlab.io/taxPPro/articles/nsti.html - - - https://waldronlab.io/taxPPro/articles/smaller_example.html - - - https://waldronlab.io/taxPPro/articles/taxPPro.html - - - https://waldronlab.io/taxPPro/articles/uncertainty_binary.html - - - https://waldronlab.io/taxPPro/articles/uncertainty_multistate.html - - - https://waldronlab.io/taxPPro/authors.html - - - https://waldronlab.io/taxPPro/index.html - - - https://waldronlab.io/taxPPro/news/index.html - - - https://waldronlab.io/taxPPro/reference/addRankPrefix.html - - - https://waldronlab.io/taxPPro/reference/classif2Table.html - - - https://waldronlab.io/taxPPro/reference/completeBinaryData.html - - - https://waldronlab.io/taxPPro/reference/conf2Fct.html - - - https://waldronlab.io/taxPPro/reference/filterData.html - - - https://waldronlab.io/taxPPro/reference/filterDataDiscrete.html - - - https://waldronlab.io/taxPPro/reference/filterDataNumeric.html - - - https://waldronlab.io/taxPPro/reference/freq2Scores.html - - - https://waldronlab.io/taxPPro/reference/freq2Scores2.html - - - https://waldronlab.io/taxPPro/reference/getDataReady.html - - - https://waldronlab.io/taxPPro/reference/getNsti.html - - - https://waldronlab.io/taxPPro/reference/getSetWithIDs.html - - - https://waldronlab.io/taxPPro/reference/getSetWithoutIDs.html - - - https://waldronlab.io/taxPPro/reference/index.html - - - https://waldronlab.io/taxPPro/reference/ltp.html - - - https://waldronlab.io/taxPPro/reference/nsti2Freq.html - - - https://waldronlab.io/taxPPro/reference/roundDec.html - - - https://waldronlab.io/taxPPro/reference/scores2Freq.html - + +https://waldronlab.io/taxPPro/404.html +https://waldronlab.io/taxPPro/articles/add_singletons.html +https://waldronlab.io/taxPPro/articles/figure_example.html +https://waldronlab.io/taxPPro/articles/index.html +https://waldronlab.io/taxPPro/articles/internal_nodes.html +https://waldronlab.io/taxPPro/articles/nsti.html +https://waldronlab.io/taxPPro/articles/smaller_example.html +https://waldronlab.io/taxPPro/articles/taxPPro.html +https://waldronlab.io/taxPPro/articles/uncertainty_binary.html +https://waldronlab.io/taxPPro/articles/uncertainty_multistate.html +https://waldronlab.io/taxPPro/authors.html +https://waldronlab.io/taxPPro/index.html +https://waldronlab.io/taxPPro/news/index.html +https://waldronlab.io/taxPPro/reference/addRankPrefix.html +https://waldronlab.io/taxPPro/reference/classif2Table.html +https://waldronlab.io/taxPPro/reference/completeBinaryData.html +https://waldronlab.io/taxPPro/reference/conf2Fct.html +https://waldronlab.io/taxPPro/reference/filterData.html +https://waldronlab.io/taxPPro/reference/filterDataDiscrete.html +https://waldronlab.io/taxPPro/reference/filterDataNumeric.html +https://waldronlab.io/taxPPro/reference/freq2Scores.html +https://waldronlab.io/taxPPro/reference/freq2Scores2.html +https://waldronlab.io/taxPPro/reference/getDataReady.html +https://waldronlab.io/taxPPro/reference/getNsti.html +https://waldronlab.io/taxPPro/reference/getSetWithIDs.html +https://waldronlab.io/taxPPro/reference/getSetWithoutIDs.html +https://waldronlab.io/taxPPro/reference/index.html +https://waldronlab.io/taxPPro/reference/ltp.html +https://waldronlab.io/taxPPro/reference/nsti2Freq.html +https://waldronlab.io/taxPPro/reference/roundDec.html +https://waldronlab.io/taxPPro/reference/scores2Freq.html +