Dockerfile.streamlit

FROM python:3.8-slim-buster

ENV STREAMLIT_SERVER_BASEURLPATH=""
ENV STREAMLIT_BROWSER_SERVERADDRESS="localhost"

ENV LANG=en_US.UTF-8 \
    LC_ALL=en_US.UTF-8

RUN apt-get update && \
    apt-get install -y git build-essential

WORKDIR /code

COPY requirements.txt /code

RUN pip install --upgrade pip && \
    pip install libpecos==0.1.0 && \
    pip install -r requirements.txt

RUN apt-get purge  -y --auto-remove git build-essential && \
    apt-get -y autoclean && \
    rm -rf /tmp/*

COPY grants_tagger/ /code/grants_tagger
COPY setup.py /code
RUN pip install . --no-dependencies

#COPY models/disease_mesh_cnn-2021.03.1/ models/disease_mesh_cnn-2021.03.1/
#COPY models/tfidf-svm-2020.05.2.pkl models/
#COPY models/scibert-2020.05.5/ models/scibert-2020.05.5/
COPY models/label_binarizer.pkl models/
#COPY models/disease_mesh_label_binarizer.pkl models/
COPY models/xlinear-0.2.3 models/xlinear-0.2.3
COPY results/ results/

EXPOSE 8501 850

CMD ["streamlit", "run", "grants_tagger/streamlit_visualize.py"]