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update README
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whitews committed Nov 3, 2024
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Expand Up @@ -86,15 +86,15 @@ Required Python dependencies:

* [flowio](https://github.com/whitews/flowio) >= 1.3.0
* [flowutils](https://github.com/whitews/flowutils) >= 1.1.0
* anytree >= 2.9
* bokeh >= 3.1
* contourpy >= 1.1.0
* lxml >= 4.9
* networkx >= 3.1
* anytree >= 2.12
* bokeh >= 3.4
* contourpy >= 1.2.0
* lxml >= 5.1
* networkx >= 3.2
* numpy >= 1.22, <2
* pandas >= 2.0
* psutils >= 5.8
* scipy >= 1.8
* pandas >= 2.1
* psutils >= 5.9
* scipy >= 1.11.1

## Installation

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The following projects and publications have utilized FlowKit. If you have a package or publication where FlowKit was used, and you want it listed here, feel free to [submit an issue](https://github.com/whitews/FlowKit/issues/new/) letting me know.

* Ishii, Hiroto et al. "Establishing a method for the cryopreservation of viable peripheral blood mononuclear cells in the International Space Station." npj Microgravity vol. 10, Article number: 84 (2024), [doi:10.1038/s41526-024-00423-2](https://doi.org/10.1038/s41526-024-00423-2)
* Dyikanov, Daniiar et al. "Comprehensive peripheral blood immunoprofiling reveals five immunotypes with immunotherapy response characteristics in patients with cancer." Cancer Cell vol. 42,5 (2024), [doi:10.1016/j.ccell.2024.04.008](https://doi.org/10.1016/j.ccell.2024.04.008)
* Mortelecque, Justine et al. "A selection and optimization strategy for single-domain antibodies targeting the PHF6 linear peptide within the Tau intrinsically disordered protein." Journal of Biological Chemistry (2024), [doi:10.1016/j.jbc.2024.107163](https://www.jbc.org/article/S0021-9258(24)01658-2/fulltext)
* Schmidt, Florian et al. "In-depth analysis of human virus-specific CD8+ T cells delineates unique phenotypic signatures for T cell specificity prediction." Cell Reports vol. 42,10 (2023), [doi:10.1016/j.celrep.2023.113250](https://www.cell.com/cell-reports/fulltext/S2211-1247(23)01262-7)
* Schuster, Jonas et al. “Combining real-time fluorescence spectroscopy and flow cytometry to reveal new insights in DOC and cell characterization of drinking water.” Frontiers in Environmental Chemistry (2022), [doi:10.3389/fenvc.2022.931067](https://www.frontiersin.org/articles/10.3389/fenvc.2022.931067/full)
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