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gpt_langchain.py
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gpt_langchain.py
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import ast
import glob
import inspect
import os
import pathlib
import pickle
import shutil
import subprocess
import tempfile
import time
import traceback
import types
import uuid
import zipfile
from collections import defaultdict
from datetime import datetime
from functools import reduce
from operator import concat
import filelock
from joblib import delayed
from langchain.callbacks import streaming_stdout
from langchain.embeddings import HuggingFaceInstructEmbeddings
from tqdm import tqdm
from enums import DocumentChoices, no_lora_str, model_token_mapping, source_prefix, source_postfix
from generate import gen_hyper, get_model, SEED
from prompter import non_hf_types, PromptType, Prompter
from utils import wrapped_partial, EThread, import_matplotlib, sanitize_filename, makedirs, get_url, flatten_list, \
get_device, ProgressParallel, remove, hash_file, clear_torch_cache, NullContext, get_hf_server, FakeTokenizer
from utils_langchain import StreamingGradioCallbackHandler
import_matplotlib()
import numpy as np
import pandas as pd
import requests
from langchain.chains.qa_with_sources import load_qa_with_sources_chain
# , GCSDirectoryLoader, GCSFileLoader
# , OutlookMessageLoader # GPL3
# ImageCaptionLoader, # use our own wrapper
# ReadTheDocsLoader, # no special file, some path, so have to give as special option
from langchain.document_loaders import PyPDFLoader, TextLoader, CSVLoader, PythonLoader, TomlLoader, \
UnstructuredURLLoader, UnstructuredHTMLLoader, UnstructuredWordDocumentLoader, UnstructuredMarkdownLoader, \
EverNoteLoader, UnstructuredEmailLoader, UnstructuredODTLoader, UnstructuredPowerPointLoader, \
UnstructuredEPubLoader, UnstructuredImageLoader, UnstructuredRTFLoader, ArxivLoader, UnstructuredPDFLoader, \
UnstructuredExcelLoader
from langchain.text_splitter import RecursiveCharacterTextSplitter, Language
from langchain.chains.question_answering import load_qa_chain
from langchain.docstore.document import Document
from langchain import PromptTemplate, HuggingFaceTextGenInference
from langchain.vectorstores import Chroma
def get_db(sources, use_openai_embedding=False, db_type='faiss',
persist_directory="db_dir", load_db_if_exists=True,
langchain_mode='notset',
collection_name=None,
hf_embedding_model="sentence-transformers/all-MiniLM-L6-v2"):
if not sources:
return None
# get embedding model
embedding = get_embedding(use_openai_embedding, hf_embedding_model=hf_embedding_model)
assert collection_name is not None or langchain_mode != 'notset'
if collection_name is None:
collection_name = langchain_mode.replace(' ', '_')
# Create vector database
if db_type == 'faiss':
from langchain.vectorstores import FAISS
db = FAISS.from_documents(sources, embedding)
elif db_type == 'weaviate':
import weaviate
from weaviate.embedded import EmbeddedOptions
from langchain.vectorstores import Weaviate
if os.getenv('WEAVIATE_URL', None):
client = _create_local_weaviate_client()
else:
client = weaviate.Client(
embedded_options=EmbeddedOptions()
)
index_name = collection_name.capitalize()
db = Weaviate.from_documents(documents=sources, embedding=embedding, client=client, by_text=False,
index_name=index_name)
elif db_type == 'chroma':
assert persist_directory is not None
os.makedirs(persist_directory, exist_ok=True)
# see if already actually have persistent db, and deal with possible changes in embedding
db = get_existing_db(None, persist_directory, load_db_if_exists, db_type, use_openai_embedding, langchain_mode,
hf_embedding_model, verbose=False)
if db is None:
db = Chroma.from_documents(documents=sources,
embedding=embedding,
persist_directory=persist_directory,
collection_name=collection_name,
anonymized_telemetry=False)
db.persist()
clear_embedding(db)
save_embed(db, use_openai_embedding, hf_embedding_model)
else:
# then just add
db, num_new_sources, new_sources_metadata = add_to_db(db, sources, db_type=db_type,
use_openai_embedding=use_openai_embedding,
hf_embedding_model=hf_embedding_model)
else:
raise RuntimeError("No such db_type=%s" % db_type)
return db
def _get_unique_sources_in_weaviate(db):
batch_size = 100
id_source_list = []
result = db._client.data_object.get(class_name=db._index_name, limit=batch_size)
while result['objects']:
id_source_list += [(obj['id'], obj['properties']['source']) for obj in result['objects']]
last_id = id_source_list[-1][0]
result = db._client.data_object.get(class_name=db._index_name, limit=batch_size, after=last_id)
unique_sources = {source for _, source in id_source_list}
return unique_sources
def add_to_db(db, sources, db_type='faiss',
avoid_dup_by_file=False,
avoid_dup_by_content=True,
use_openai_embedding=False,
hf_embedding_model=None):
assert hf_embedding_model is not None
num_new_sources = len(sources)
if not sources:
return db, num_new_sources, []
if db_type == 'faiss':
db.add_documents(sources)
elif db_type == 'weaviate':
# FIXME: only control by file name, not hash yet
if avoid_dup_by_file or avoid_dup_by_content:
unique_sources = _get_unique_sources_in_weaviate(db)
sources = [x for x in sources if x.metadata['source'] not in unique_sources]
num_new_sources = len(sources)
if num_new_sources == 0:
return db, num_new_sources, []
db.add_documents(documents=sources)
elif db_type == 'chroma':
collection = get_documents(db)
# files we already have:
metadata_files = set([x['source'] for x in collection['metadatas']])
if avoid_dup_by_file:
# Too weak in case file changed content, assume parent shouldn't pass true for this for now
raise RuntimeError("Not desired code path")
sources = [x for x in sources if x.metadata['source'] not in metadata_files]
if avoid_dup_by_content:
# look at hash, instead of page_content
# migration: If no hash previously, avoid updating,
# since don't know if need to update and may be expensive to redo all unhashed files
metadata_hash_ids = set(
[x['hashid'] for x in collection['metadatas'] if 'hashid' in x and x['hashid'] not in ["None", None]])
# avoid sources with same hash
sources = [x for x in sources if x.metadata.get('hashid') not in metadata_hash_ids]
num_nohash = len([x for x in sources if not x.metadata.get('hashid')])
print("Found %s new sources (%d have no hash in original source,"
" so have to reprocess for migration to sources with hash)" % (len(sources), num_nohash), flush=True)
# get new file names that match existing file names. delete existing files we are overridding
dup_metadata_files = set([x.metadata['source'] for x in sources if x.metadata['source'] in metadata_files])
print("Removing %s duplicate files from db because ingesting those as new documents" % len(
dup_metadata_files), flush=True)
client_collection = db._client.get_collection(name=db._collection.name,
embedding_function=db._collection._embedding_function)
for dup_file in dup_metadata_files:
dup_file_meta = dict(source=dup_file)
try:
client_collection.delete(where=dup_file_meta)
except KeyError:
pass
num_new_sources = len(sources)
if num_new_sources == 0:
return db, num_new_sources, []
db.add_documents(documents=sources)
db.persist()
clear_embedding(db)
save_embed(db, use_openai_embedding, hf_embedding_model)
else:
raise RuntimeError("No such db_type=%s" % db_type)
new_sources_metadata = [x.metadata for x in sources]
return db, num_new_sources, new_sources_metadata
def create_or_update_db(db_type, persist_directory, collection_name,
sources, use_openai_embedding, add_if_exists, verbose, hf_embedding_model):
if db_type == 'weaviate':
import weaviate
from weaviate.embedded import EmbeddedOptions
if os.getenv('WEAVIATE_URL', None):
client = _create_local_weaviate_client()
else:
client = weaviate.Client(
embedded_options=EmbeddedOptions()
)
index_name = collection_name.replace(' ', '_').capitalize()
if client.schema.exists(index_name) and not add_if_exists:
client.schema.delete_class(index_name)
if verbose:
print("Removing %s" % index_name, flush=True)
elif db_type == 'chroma':
if not os.path.isdir(persist_directory) or not add_if_exists:
if os.path.isdir(persist_directory):
if verbose:
print("Removing %s" % persist_directory, flush=True)
remove(persist_directory)
if verbose:
print("Generating db", flush=True)
if not add_if_exists:
if verbose:
print("Generating db", flush=True)
else:
if verbose:
print("Loading and updating db", flush=True)
db = get_db(sources,
use_openai_embedding=use_openai_embedding,
db_type=db_type,
persist_directory=persist_directory,
langchain_mode=collection_name,
hf_embedding_model=hf_embedding_model)
return db
def get_embedding(use_openai_embedding, hf_embedding_model="sentence-transformers/all-MiniLM-L6-v2"):
# Get embedding model
if use_openai_embedding:
assert os.getenv("OPENAI_API_KEY") is not None, "Set ENV OPENAI_API_KEY"
from langchain.embeddings import OpenAIEmbeddings
embedding = OpenAIEmbeddings(disallowed_special=())
else:
# to ensure can fork without deadlock
from langchain.embeddings import HuggingFaceEmbeddings
device, torch_dtype, context_class = get_device_dtype()
model_kwargs = dict(device=device)
if 'instructor' in hf_embedding_model:
encode_kwargs = {'normalize_embeddings': True}
embedding = HuggingFaceInstructEmbeddings(model_name=hf_embedding_model,
model_kwargs=model_kwargs,
encode_kwargs=encode_kwargs)
else:
embedding = HuggingFaceEmbeddings(model_name=hf_embedding_model, model_kwargs=model_kwargs)
return embedding
def get_answer_from_sources(chain, sources, question):
return chain(
{
"input_documents": sources,
"question": question,
},
return_only_outputs=True,
)["output_text"]
"""Wrapper around Huggingface text generation inference API."""
from functools import partial
from typing import Any, Dict, List, Optional, Set
from pydantic import Extra, Field, root_validator
from langchain.callbacks.manager import CallbackManagerForLLMRun
"""Wrapper around Huggingface text generation inference API."""
from functools import partial
from typing import Any, Dict, List, Optional
from pydantic import Extra, Field, root_validator
from langchain.callbacks.manager import CallbackManagerForLLMRun
from langchain.llms.base import LLM
class GradioInference(LLM):
"""
Gradio generation inference API.
"""
inference_server_url: str = ""
temperature: float = 0.8
top_p: Optional[float] = 0.95
top_k: Optional[int] = None
num_beams: Optional[int] = 1
max_new_tokens: int = 512
min_new_tokens: int = 1
early_stopping: bool = False
max_time: int = 180
repetition_penalty: Optional[float] = None
num_return_sequences: Optional[int] = 1
do_sample: bool = False
chat_client: bool = False
return_full_text: bool = True
stream: bool = False
sanitize_bot_response: bool = False
prompter: Any = None
client: Any = None
class Config:
"""Configuration for this pydantic object."""
extra = Extra.forbid
@root_validator()
def validate_environment(cls, values: Dict) -> Dict:
"""Validate that python package exists in environment."""
try:
if values['client'] is None:
import gradio_client
values["client"] = gradio_client.Client(
values["inference_server_url"]
)
except ImportError:
raise ImportError(
"Could not import gradio_client python package. "
"Please install it with `pip install gradio_client`."
)
return values
@property
def _llm_type(self) -> str:
"""Return type of llm."""
return "gradio_inference"
def _call(
self,
prompt: str,
stop: Optional[List[str]] = None,
run_manager: Optional[CallbackManagerForLLMRun] = None,
**kwargs: Any,
) -> str:
# NOTE: prompt here has no prompt_type (e.g. human: bot:) prompt injection,
# so server should get prompt_type or '', not plain
# This is good, so gradio server can also handle stopping.py conditions
# this is different than TGI server that uses prompter to inject prompt_type prompting
stream_output = self.stream
gr_client = self.client
client_langchain_mode = 'Disabled'
top_k_docs = 1
chunk = True
chunk_size = 512
client_kwargs = dict(instruction=prompt if self.chat_client else '', # only for chat=True
iinput='', # only for chat=True
context='',
# streaming output is supported, loops over and outputs each generation in streaming mode
# but leave stream_output=False for simple input/output mode
stream_output=stream_output,
prompt_type=self.prompter.prompt_type,
prompt_dict='',
temperature=self.temperature,
top_p=self.top_p,
top_k=self.top_k,
num_beams=self.num_beams,
max_new_tokens=self.max_new_tokens,
min_new_tokens=self.min_new_tokens,
early_stopping=self.early_stopping,
max_time=self.max_time,
repetition_penalty=self.repetition_penalty,
num_return_sequences=self.num_return_sequences,
do_sample=self.do_sample,
chat=self.chat_client,
instruction_nochat=prompt if not self.chat_client else '',
iinput_nochat='', # only for chat=False
langchain_mode=client_langchain_mode,
top_k_docs=top_k_docs,
chunk=chunk,
chunk_size=chunk_size,
document_choice=[DocumentChoices.All_Relevant.name],
)
api_name = '/submit_nochat_api' # NOTE: like submit_nochat but stable API for string dict passing
if not stream_output:
res = gr_client.predict(str(dict(client_kwargs)), api_name=api_name)
res_dict = ast.literal_eval(res)
text = res_dict['response']
return self.prompter.get_response(prompt + text, prompt=prompt,
sanitize_bot_response=self.sanitize_bot_response)
else:
text_callback = None
if run_manager:
text_callback = partial(
run_manager.on_llm_new_token, verbose=self.verbose
)
job = gr_client.submit(str(dict(client_kwargs)), api_name=api_name)
text0 = ''
while not job.done():
outputs_list = job.communicator.job.outputs
if outputs_list:
res = job.communicator.job.outputs[-1]
res_dict = ast.literal_eval(res)
text = res_dict['response']
text = self.prompter.get_response(prompt + text, prompt=prompt,
sanitize_bot_response=self.sanitize_bot_response)
# FIXME: derive chunk from full for now
text_chunk = text[len(text0):]
# save old
text0 = text
if text_callback:
text_callback(text_chunk)
time.sleep(0.01)
# ensure get last output to avoid race
res_all = job.outputs()
if len(res_all) > 0:
res = res_all[-1]
res_dict = ast.literal_eval(res)
text = res_dict['response']
# FIXME: derive chunk from full for now
else:
# go with old if failure
text = text0
text_chunk = text[len(text0):]
if text_callback:
text_callback(text_chunk)
return self.prompter.get_response(prompt + text, prompt=prompt,
sanitize_bot_response=self.sanitize_bot_response)
class H2OHuggingFaceTextGenInference(HuggingFaceTextGenInference):
max_new_tokens: int = 512
do_sample: bool = False
top_k: Optional[int] = None
top_p: Optional[float] = 0.95
typical_p: Optional[float] = 0.95
temperature: float = 0.8
repetition_penalty: Optional[float] = None
return_full_text: bool = False
stop_sequences: List[str] = Field(default_factory=list)
seed: Optional[int] = None
inference_server_url: str = ""
timeout: int = 300
headers: dict = None
stream: bool = False
sanitize_bot_response: bool = False
prompter: Any = None
tokenizer: Any = None
client: Any = None
@root_validator()
def validate_environment(cls, values: Dict) -> Dict:
"""Validate that python package exists in environment."""
try:
if values['client'] is None:
import text_generation
values["client"] = text_generation.Client(
values["inference_server_url"],
timeout=values["timeout"],
headers=values["headers"],
)
except ImportError:
raise ImportError(
"Could not import text_generation python package. "
"Please install it with `pip install text_generation`."
)
return values
def _call(
self,
prompt: str,
stop: Optional[List[str]] = None,
run_manager: Optional[CallbackManagerForLLMRun] = None,
**kwargs: Any,
) -> str:
if stop is None:
stop = self.stop_sequences
else:
stop += self.stop_sequences
# HF inference server needs control over input tokens
assert self.tokenizer is not None
from h2oai_pipeline import H2OTextGenerationPipeline
prompt, num_prompt_tokens = H2OTextGenerationPipeline.limit_prompt(prompt, self.tokenizer)
# NOTE: TGI server does not add prompting, so must do here
data_point = dict(context='', instruction=prompt, input='')
prompt = self.prompter.generate_prompt(data_point)
gen_server_kwargs = dict(do_sample=self.do_sample,
stop_sequences=stop,
max_new_tokens=self.max_new_tokens,
top_k=self.top_k,
top_p=self.top_p,
typical_p=self.typical_p,
temperature=self.temperature,
repetition_penalty=self.repetition_penalty,
return_full_text=self.return_full_text,
seed=self.seed,
)
gen_server_kwargs.update(kwargs)
# lower bound because client is re-used if multi-threading
self.client.timeout = max(300, self.timeout)
if not self.stream:
res = self.client.generate(
prompt,
**gen_server_kwargs,
)
if self.return_full_text:
gen_text = res.generated_text[len(prompt):]
else:
gen_text = res.generated_text
# remove stop sequences from the end of the generated text
for stop_seq in stop:
if stop_seq in gen_text:
gen_text = gen_text[:gen_text.index(stop_seq)]
text = prompt + gen_text
text = self.prompter.get_response(text, prompt=prompt,
sanitize_bot_response=self.sanitize_bot_response)
else:
text_callback = None
if run_manager:
text_callback = partial(
run_manager.on_llm_new_token, verbose=self.verbose
)
# parent handler of streamer expects to see prompt first else output="" and lose if prompt=None in prompter
if text_callback:
text_callback(prompt)
text = ""
# Note: Streaming ignores return_full_text=True
for response in self.client.generate_stream(prompt, **gen_server_kwargs):
text_chunk = response.token.text
text += text_chunk
text = self.prompter.get_response(prompt + text, prompt=prompt,
sanitize_bot_response=self.sanitize_bot_response)
# stream part
is_stop = False
for stop_seq in stop:
if stop_seq in response.token.text:
is_stop = True
break
if is_stop:
break
if not response.token.special:
if text_callback:
text_callback(response.token.text)
return text
from langchain.chat_models import ChatOpenAI
class H2OChatOpenAI(ChatOpenAI):
@classmethod
def all_required_field_names(cls) -> Set:
all_required_field_names = super(ChatOpenAI, cls).all_required_field_names()
all_required_field_names.update({'top_p', 'frequency_penalty', 'presence_penalty'})
return all_required_field_names
def get_llm(use_openai_model=False,
model_name=None,
model=None,
tokenizer=None,
inference_server=None,
stream_output=False,
do_sample=False,
temperature=0.1,
top_k=40,
top_p=0.7,
num_beams=1,
max_new_tokens=256,
min_new_tokens=1,
early_stopping=False,
max_time=180,
repetition_penalty=1.0,
num_return_sequences=1,
prompt_type=None,
prompt_dict=None,
prompter=None,
sanitize_bot_response=False,
verbose=False,
):
if use_openai_model or inference_server in ['openai', 'openai_chat']:
if use_openai_model and model_name is None:
model_name = "gpt-3.5-turbo"
if inference_server == 'openai':
from langchain.llms import OpenAI
cls = OpenAI
else:
cls = H2OChatOpenAI
callbacks = [StreamingGradioCallbackHandler()]
llm = cls(model_name=model_name,
temperature=temperature if do_sample else 0,
# FIXME: Need to count tokens and reduce max_new_tokens to fit like in generate.py
max_tokens=max_new_tokens,
top_p=top_p if do_sample else 1,
frequency_penalty=0,
presence_penalty=1.07 - repetition_penalty + 0.6, # so good default
callbacks=callbacks if stream_output else None,
)
streamer = callbacks[0] if stream_output else None
if inference_server in ['openai', 'openai_chat']:
prompt_type = inference_server
else:
prompt_type = prompt_type or 'plain'
elif inference_server:
assert inference_server.startswith(
'http'), "Malformed inference_server=%s. Did you add http:// in front?" % inference_server
from gradio_utils.grclient import GradioClient
from text_generation import Client as HFClient
if isinstance(model, GradioClient):
gr_client = model
hf_client = None
else:
gr_client = None
hf_client = model
assert isinstance(hf_client, HFClient)
inference_server, headers = get_hf_server(inference_server)
# quick sanity check to avoid long timeouts, just see if can reach server
requests.get(inference_server, timeout=int(os.getenv('REQUEST_TIMEOUT_FAST', '10')))
callbacks = [StreamingGradioCallbackHandler()]
assert prompter is not None
stop_sequences = list(set(prompter.terminate_response + [prompter.PreResponse]))
stop_sequences = [x for x in stop_sequences if x]
if gr_client:
chat_client = False
llm = GradioInference(
inference_server_url=inference_server,
return_full_text=True,
temperature=temperature,
top_p=top_p,
top_k=top_k,
num_beams=num_beams,
max_new_tokens=max_new_tokens,
min_new_tokens=min_new_tokens,
early_stopping=early_stopping,
max_time=max_time,
repetition_penalty=repetition_penalty,
num_return_sequences=num_return_sequences,
do_sample=do_sample,
chat_client=chat_client,
callbacks=callbacks if stream_output else None,
stream=stream_output,
prompter=prompter,
client=gr_client,
sanitize_bot_response=sanitize_bot_response,
)
elif hf_client:
llm = H2OHuggingFaceTextGenInference(
inference_server_url=inference_server,
do_sample=do_sample,
max_new_tokens=max_new_tokens,
repetition_penalty=repetition_penalty,
return_full_text=True,
seed=SEED,
stop_sequences=stop_sequences,
temperature=temperature,
top_k=top_k,
top_p=top_p,
# typical_p=top_p,
callbacks=callbacks if stream_output else None,
stream=stream_output,
prompter=prompter,
tokenizer=tokenizer,
client=hf_client,
timeout=max_time,
sanitize_bot_response=sanitize_bot_response,
)
else:
raise RuntimeError("No defined client")
streamer = callbacks[0] if stream_output else None
elif model_name in non_hf_types:
if model_name == 'llama':
callbacks = [StreamingGradioCallbackHandler()]
streamer = callbacks[0] if stream_output else None
else:
# stream_output = False
# doesn't stream properly as generator, but at least
callbacks = [streaming_stdout.StreamingStdOutCallbackHandler()]
streamer = None
if prompter:
prompt_type = prompter.prompt_type
else:
prompter = Prompter(prompt_type, prompt_dict, debug=False, chat=False, stream_output=stream_output)
pass # assume inputted prompt_type is correct
from gpt4all_llm import get_llm_gpt4all
llm = get_llm_gpt4all(model_name, model=model, max_new_tokens=max_new_tokens,
temperature=temperature,
repetition_penalty=repetition_penalty,
top_k=top_k,
top_p=top_p,
callbacks=callbacks,
verbose=verbose,
streaming=stream_output,
prompter=prompter,
)
else:
if model is None:
# only used if didn't pass model in
assert tokenizer is None
prompt_type = 'human_bot'
if model_name is None:
model_name = 'h2oai/h2ogpt-oasst1-512-12b'
# model_name = 'h2oai/h2ogpt-oig-oasst1-512-6_9b'
# model_name = 'h2oai/h2ogpt-oasst1-512-20b'
inference_server = ''
model, tokenizer, device = get_model(load_8bit=True, base_model=model_name,
inference_server=inference_server, gpu_id=0)
max_max_tokens = tokenizer.model_max_length
gen_kwargs = dict(do_sample=do_sample,
temperature=temperature,
top_k=top_k,
top_p=top_p,
num_beams=num_beams,
max_new_tokens=max_new_tokens,
min_new_tokens=min_new_tokens,
early_stopping=early_stopping,
max_time=max_time,
repetition_penalty=repetition_penalty,
num_return_sequences=num_return_sequences,
return_full_text=True,
handle_long_generation=None)
assert len(set(gen_hyper).difference(gen_kwargs.keys())) == 0
if stream_output:
skip_prompt = False
from generate import H2OTextIteratorStreamer
decoder_kwargs = {}
streamer = H2OTextIteratorStreamer(tokenizer, skip_prompt=skip_prompt, block=False, **decoder_kwargs)
gen_kwargs.update(dict(streamer=streamer))
else:
streamer = None
from h2oai_pipeline import H2OTextGenerationPipeline
pipe = H2OTextGenerationPipeline(model=model, use_prompter=True,
prompter=prompter,
prompt_type=prompt_type,
prompt_dict=prompt_dict,
sanitize_bot_response=sanitize_bot_response,
chat=False, stream_output=stream_output,
tokenizer=tokenizer,
# leave some room for 1 paragraph, even if min_new_tokens=0
max_input_tokens=max_max_tokens - max(min_new_tokens, 256),
**gen_kwargs)
# pipe.task = "text-generation"
# below makes it listen only to our prompt removal,
# not built in prompt removal that is less general and not specific for our model
pipe.task = "text2text-generation"
from langchain.llms import HuggingFacePipeline
llm = HuggingFacePipeline(pipeline=pipe)
return llm, model_name, streamer, prompt_type
def get_device_dtype():
# torch.device("cuda") leads to cuda:x cuda:y mismatches for multi-GPU consistently
import torch
n_gpus = torch.cuda.device_count() if torch.cuda.is_available else 0
device = 'cpu' if n_gpus == 0 else 'cuda'
# from utils import NullContext
# context_class = NullContext if n_gpus > 1 or n_gpus == 0 else context_class
context_class = torch.device
torch_dtype = torch.float16 if device == 'cuda' else torch.float32
return device, torch_dtype, context_class
def get_wiki_data(title, first_paragraph_only, text_limit=None, take_head=True):
"""
Get wikipedia data from online
:param title:
:param first_paragraph_only:
:param text_limit:
:param take_head:
:return:
"""
filename = 'wiki_%s_%s_%s_%s.data' % (first_paragraph_only, title, text_limit, take_head)
url = f"https://en.wikipedia.org/w/api.php?format=json&action=query&prop=extracts&explaintext=1&titles={title}"
if first_paragraph_only:
url += "&exintro=1"
import json
if not os.path.isfile(filename):
data = requests.get(url).json()
json.dump(data, open(filename, 'wt'))
else:
data = json.load(open(filename, "rt"))
page_content = list(data["query"]["pages"].values())[0]["extract"]
if take_head is not None and text_limit is not None:
page_content = page_content[:text_limit] if take_head else page_content[-text_limit:]
title_url = str(title).replace(' ', '_')
return Document(
page_content=page_content,
metadata={"source": f"https://en.wikipedia.org/wiki/{title_url}"},
)
def get_wiki_sources(first_para=True, text_limit=None):
"""
Get specific named sources from wikipedia
:param first_para:
:param text_limit:
:return:
"""
default_wiki_sources = ['Unix', 'Microsoft_Windows', 'Linux']
wiki_sources = list(os.getenv('WIKI_SOURCES', default_wiki_sources))
return [get_wiki_data(x, first_para, text_limit=text_limit) for x in wiki_sources]
def get_github_docs(repo_owner, repo_name):
"""
Access github from specific repo
:param repo_owner:
:param repo_name:
:return:
"""
with tempfile.TemporaryDirectory() as d:
subprocess.check_call(
f"git clone --depth 1 https://github.com/{repo_owner}/{repo_name}.git .",
cwd=d,
shell=True,
)
git_sha = (
subprocess.check_output("git rev-parse HEAD", shell=True, cwd=d)
.decode("utf-8")
.strip()
)
repo_path = pathlib.Path(d)
markdown_files = list(repo_path.glob("*/*.md")) + list(
repo_path.glob("*/*.mdx")
)
for markdown_file in markdown_files:
with open(markdown_file, "r") as f:
relative_path = markdown_file.relative_to(repo_path)
github_url = f"https://github.com/{repo_owner}/{repo_name}/blob/{git_sha}/{relative_path}"
yield Document(page_content=f.read(), metadata={"source": github_url})
def get_dai_pickle(dest="."):
from huggingface_hub import hf_hub_download
# True for case when locally already logged in with correct token, so don't have to set key
token = os.getenv('HUGGINGFACE_API_TOKEN', True)
path_to_zip_file = hf_hub_download('h2oai/dai_docs', 'dai_docs.pickle', token=token, repo_type='dataset')
shutil.copy(path_to_zip_file, dest)
def get_dai_docs(from_hf=False, get_pickle=True):
"""
Consume DAI documentation, or consume from public pickle
:param from_hf: get DAI docs from HF, then generate pickle for later use by LangChain
:param get_pickle: Avoid raw DAI docs, just get pickle directly from HF
:return:
"""
import pickle
if get_pickle:
get_dai_pickle()
dai_store = 'dai_docs.pickle'
dst = "working_dir_docs"
if not os.path.isfile(dai_store):
from create_data import setup_dai_docs
dst = setup_dai_docs(dst=dst, from_hf=from_hf)
import glob
files = list(glob.glob(os.path.join(dst, '*rst'), recursive=True))
basedir = os.path.abspath(os.getcwd())
from create_data import rst_to_outputs
new_outputs = rst_to_outputs(files)
os.chdir(basedir)
pickle.dump(new_outputs, open(dai_store, 'wb'))
else:
new_outputs = pickle.load(open(dai_store, 'rb'))
sources = []
for line, file in new_outputs:
# gradio requires any linked file to be with app.py
sym_src = os.path.abspath(os.path.join(dst, file))
sym_dst = os.path.abspath(os.path.join(os.getcwd(), file))
if os.path.lexists(sym_dst):
os.remove(sym_dst)
os.symlink(sym_src, sym_dst)
itm = Document(page_content=line, metadata={"source": file})
# NOTE: yield has issues when going into db, loses metadata
# yield itm
sources.append(itm)
return sources
import distutils.spawn
have_tesseract = distutils.spawn.find_executable("tesseract")
have_libreoffice = distutils.spawn.find_executable("libreoffice")
import pkg_resources
try:
assert pkg_resources.get_distribution('arxiv') is not None
assert pkg_resources.get_distribution('pymupdf') is not None
have_arxiv = True
except (pkg_resources.DistributionNotFound, AssertionError):
have_arxiv = False
try:
assert pkg_resources.get_distribution('pymupdf') is not None
have_pymupdf = True
except (pkg_resources.DistributionNotFound, AssertionError):
have_pymupdf = False
try:
assert pkg_resources.get_distribution('selenium') is not None
have_selenium = True
except (pkg_resources.DistributionNotFound, AssertionError):
have_selenium = False
try:
assert pkg_resources.get_distribution('playwright') is not None
have_playwright = True
except (pkg_resources.DistributionNotFound, AssertionError):
have_playwright = False
# disable, hangs too often
have_playwright = False
image_types = ["png", "jpg", "jpeg"]
non_image_types = ["pdf", "txt", "csv", "toml", "py", "rst", "rtf",
"md",
"html", "mhtml",
"enex", "eml", "epub", "odt", "pptx", "ppt",
"zip", "urls",
]
# "msg", GPL3
if have_libreoffice:
non_image_types.extend(["docx", "doc", "xls", "xlsx"])
file_types = non_image_types + image_types
def add_meta(docs1, file):
file_extension = pathlib.Path(file).suffix
hashid = hash_file(file)
if not isinstance(docs1, (list, tuple, types.GeneratorType)):
docs1 = [docs1]
[x.metadata.update(dict(input_type=file_extension, date=str(datetime.now), hashid=hashid)) for x in docs1]
def file_to_doc(file, base_path=None, verbose=False, fail_any_exception=False,
chunk=True, chunk_size=512,
is_url=False, is_txt=False,
enable_captions=True,
captions_model=None,
enable_ocr=False, caption_loader=None,
headsize=50):
if file is None:
if fail_any_exception:
raise RuntimeError("Unexpected None file")
else:
return []
doc1 = [] # in case no support, or disabled support
if base_path is None and not is_txt and not is_url:
# then assume want to persist but don't care which path used
# can't be in base_path
dir_name = os.path.dirname(file)
base_name = os.path.basename(file)
# if from gradio, will have its own temp uuid too, but that's ok
base_name = sanitize_filename(base_name) + "_" + str(uuid.uuid4())[:10]
base_path = os.path.join(dir_name, base_name)
if is_url:
if file.lower().startswith('arxiv:'):
query = file.lower().split('arxiv:')
if len(query) == 2 and have_arxiv:
query = query[1]
docs1 = ArxivLoader(query=query, load_max_docs=20, load_all_available_meta=True).load()
# ensure string, sometimes None
[[x.metadata.update({k: str(v)}) for k, v in x.metadata.items()] for x in docs1]
query_url = f"https://arxiv.org/abs/{query}"