.pre-commit-config.yaml

repos:
  - repo: https://github.com/zakstucke/zetch
    rev: v0.0.16
    hooks:
      - id: zetch

  # Formats, lints, organises imports, handles tailwindcss classes in ts|tsx|js|jsx|cjs|json|jsonc etc.
  # Formatting same as vscode extension: https://marketplace.visualstudio.com/items?itemName=biomejs.biome
  # Configure from ./biome.json
  - repo: https://github.com/biomejs/pre-commit
    rev: "v0.1.0"  # For now biome doesn't update this, biome version specified in additional_dependencies
    hooks:
      - id: biome-check
        # Note when updating version, update the biome version in initial_setup.sh too for the local version
        additional_dependencies: ["@biomejs/biome@1.5.3"]

  # Toml formatting,
  # same as vscode extension: https://marketplace.visualstudio.com/items?itemName=tamasfe.even-better-toml
  # Configure from ./taplo.toml
  # NOTE: temporary source whilst taplo sort out their internal packaging, should switch to proper in the end, see:
  # https://github.com/tamasfe/taplo/pull/549
  # https://github.com/tamasfe/taplo/issues/535
  - repo: https://github.com/redeboer/taplo-pre-commit
    rev: v0.9.1rc1
    hooks:
      - id: taplo
        args: ["format", "--config", "./taplo.toml"]

  # Yaml formatting,
  # same as vscode extension: https://marketplace.visualstudio.com/items?itemName=bluebrown.yamlfmt
  # Configure from ./.yamlfmt
  - repo: https://github.com/google/yamlfmt
    # Note: if updating version, make sure to update your installed version,
    # plus the installer in initial_setup.sh, which is needed for vscode extension.
    rev: v0.10.0
    hooks:
      - id: yamlfmt

  # Spelling mistakes:
  - repo: https://github.com/codespell-project/codespell
    rev: v2.2.6
    hooks:
      - id: codespell
        # The codespell native exclude doesn't work,
        # have to do it from pre-commit instead (https://github.com/codespell-project/codespell/issues/1498)
        exclude: "(?x)^(\n    .*\\.lock|\n    .*\\.pyc|\n    .*lock\\.json|\n    .*rustfmt\\.toml|\n)$
          \   \n"
        args:
          # Ignore don't error on specific words that always fail: (foo,bar,baz...)
          - -L=crate
          - -L=numer
          - -L=anull

  # Ruff: linting and formatting for python code:
  - repo: https://github.com/astral-sh/ruff-pre-commit
    rev: v0.2.1
    hooks:
      # Run the formatter.
      - id: ruff-format
        types_or: [python, pyi, jupyter]
        args: [--config=./py/ruff.toml]
      # Run the linter.
      - id: ruff
        types_or: [python, pyi, jupyter]
        args: [--fix, --config=./py/ruff.toml]

  # Bandit: finds security vulnerabilities in python code:
  - repo: https://github.com/PyCQA/bandit
    rev: '1.7.5'
    hooks:
      - id: bandit
        args: ["-c", "./py/bandit.yml", "./py"]


  # Cargo/clippy: linting and formatting for rust code:
  - repo: local
    hooks:
      - id: cargo-fmt
        name: cargo-fmt
        description: "Format files with cargo fmt."
        language: system
        types: [rust]
        entry: cargo fmt
        args: [--manifest-path=./rust/Cargo.toml, --]
      - id: cargo-rust-check
        name: cargo-rust-check
        description: Check the rust package for errors using cargo check on needed targets and features.
        entry: ./dev_scripts/test.sh cargo_rust_check
        language: system
        types: [rust]
        pass_filenames: false
      - id: cargo-clippy
        name: cargo-clippy
        description: Lint rust sources
        entry: cargo clippy
        language: system
        args: ["--manifest-path", "./rust/Cargo.toml", "--all-features", "--", "-D", "warnings"]
        types: [rust]
        pass_filenames: false

  # Cargo/clippy: linting and formatting for rust-backed python code:
  - repo: local
    hooks:
      - id: cargo-fmt
        name: cargo-fmt
        description: "Format files with cargo fmt."
        entry: cargo fmt
        language: system
        types: [rust]
        args: [--manifest-path=./py_rust/Cargo.toml, --]
      - id: cargo-py-rust-check
        name: cargo-py-rust-check
        description: Check the rust-backed python package for errors using cargo check on needed targets
          and features.
        entry: ./dev_scripts/test.sh cargo_py_rust_check
        language: system
        types: [rust]
        pass_filenames: false
      - id: cargo-clippy
        name: cargo-clippy
        description: Lint rust sources
        entry: cargo clippy
        language: system
        args: ["--manifest-path", "./py_rust/Cargo.toml", "--all-features", "--", "-D", "warnings"]
        types: [rust]
        pass_filenames: false

  - repo: https://github.com/pre-commit/pre-commit-hooks
    rev: v2.3.0
    hooks:
      - id: check-added-large-files
      - id: check-case-conflict
      - id: trailing-whitespace