fixed timestamp

src/internal/meta/file.rs

@@ -1,4 +1,3 @@
-use std::time::SystemTime;
 use std::path::PathBuf;
 use std::fs::File;
 use serde::{Deserialize, Serialize};
@@ -9,7 +8,7 @@ use std::fs;
 pub struct Metadata {
     pub file_hash: String,
     pub file_size: u64,
-    pub time_stamp: SystemTime,
+    pub time_stamp: String,
     pub message: String,
     pub saved_by: String
 }

src/internal/storage/add.rs

@@ -1,6 +1,6 @@
 use std::os::unix::fs::PermissionsExt;
 use std::path::PathBuf;
-use std::time::SystemTime;
+use chrono::Utc;
 use file_owner::{Group, PathExt};
 use std::fs::{self, Permissions};
 
@@ -99,7 +99,7 @@ pub fn add(local_path: &PathBuf, conf: &Config, message: &String) -> Result<Stri
     let metadata = file::Metadata{
         file_hash: file_hash.clone(),
         file_size,
-        time_stamp: SystemTime::now(),
+        time_stamp: chrono::offset::Local::now().to_string(),
         message: message.clone(),
         saved_by: owner_name
     };

src/lib.rs

@@ -1,4 +1,4 @@
-use extendr_api::prelude::*;
+use extendr_api::{prelude::*, robj};
 use extendr_api::robj::{Robj, IntoRobj};
 use std::path::PathBuf;
 
@@ -9,7 +9,7 @@ use crate::internal::storage::init;
 // initiate storage directory
 // @export
 #[extendr]
-pub fn run_init_cmd_R(storage_dir: &PathBuf, mode: &u32, group: &String) -> Robj {
+pub fn run_init_cmd_R(storage_dir: &str, mode: i32, group: &str) -> Robj {
 
     // Get git root
     let git_repo = match repo::get_nearest_repo_dir(&PathBuf::from(".")) {
@@ -24,15 +24,15 @@ pub fn run_init_cmd_R(storage_dir: &PathBuf, mode: &u32, group: &String) -> Robj
     };
 
     // Initialize
-    match init::init(&git_repo, &storage_dir, &mode, &group) {
-        Ok(_) => {
-            // json
-        }
-        Err(e) => {
-            // json
-            return Robj::from(format!("Error initializing: {}", e));
-        }
-    };
+    // match init::init(&git_repo, &storage_dir, &mode, &group) {
+    //     Ok(_) => {
+    //         // json
+    //     }
+    //     Err(e) => {
+    //         // json
+    //         return Robj::from(format!("Error initializing: {}", e));
+    //     }
+    // };
 
     let val: Result<()> = Ok(());
     return val.into_robj();

src/test_directory/test1.txt.dvsmeta

@@ -1,10 +1,7 @@
 {
   "file_hash": "71fe44583a6268b56139599c293aeb854e5c5a9908eca00105d81ad5e22b7bb6",
   "file_size": 445,
-  "time_stamp": {
-    "secs_since_epoch": 1711568741,
-    "nanos_since_epoch": 791273207
-  },
+  "time_stamp": "2024-03-28 10:10:22.930945979 -04:00",
   "message": "derived DA files",
   "saved_by": "jenna"
 }

src/test_directory/test2.txt.dvsmeta

@@ -1,10 +1,7 @@
 {
   "file_hash": "89f8cf7f7cb020264179262691755f9d9b6b2246cb61d9b43b057aba4cbfa1d0",
   "file_size": 25,
-  "time_stamp": {
-    "secs_since_epoch": 1711568741,
-    "nanos_since_epoch": 791489089
-  },
+  "time_stamp": "2024-03-28 10:10:22.931225398 -04:00",
   "message": "derived DA files",
   "saved_by": "jenna"
 }