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moved links to nmm point to releases and added link in slack-alerts
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mduncans committed Sep 25, 2024
1 parent 6d7ab72 commit 638c111
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2 changes: 1 addition & 1 deletion vignettes/custom-alerts.Rmd
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Expand Up @@ -40,7 +40,7 @@ options('slurmtools.submission_root' = file.path(nonmem, "submission-log"))
## Submitting a NONMEM job with nmm

Instead of using bbi we can use `nmm` ([NONMEM
Monitor](https://github.com/A2-ai/nonmem-monitor)) which currently has
Monitor](https://github.com/A2-ai/nonmem-monitor/releases)) which currently has
some additional functionality of sending notifications about zero
gradients, missing -1E9 lines in ext file, and some very basic control
stream errors. Nonmem-monitor also allows for setting up an alerter to
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6 changes: 4 additions & 2 deletions vignettes/slack-alerts.Rmd
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Expand Up @@ -49,14 +49,16 @@ if (file.exists(file.path(nonmem, paste0(mod_number, ".yaml")))) {

# Cut me some Slack

There is also functionality to pair `nmm` with
There is also functionality to pair [`nmm`](https://github.com/A2-ai/nonmem-monitor/releases) with
[slack_notifier](https://github.com/A2-ai/slack_notifier/releases/) and
get messages sent directly to you via a slack bot. This requires you to
download the slack_notifier binaries. You can download the latest
release and extract the binary and again save it to `~/.local/bin`.

```{r}
``` r
Sys.which("snt")
snt
"/cluster-data/user-homes/matthews/.local/bin/snt"
```

`snt` requires the slack bot OAuth token which is found from
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