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Update units in default_config.yaml
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Co-authored-by: Sylvia Whittle <[email protected]>
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ns-rse and SylviaWhittle committed Nov 12, 2024
1 parent c817ed8 commit 56b7777
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions topostats/default_config.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -74,9 +74,9 @@ disordered_tracing:
method_outlier: mean_abs # The method to prune branches based on height. Options : abs | mean_abs | iqr.
nodestats:
run: true # Options : true, false
node_joining_length: 7.0 # The distance over which to join nearby crossing points.
node_extend_dist: 14.0 # The distance in ?? over which to join nearby odd-branched nodes.
branch_pairing_length: 20.0 # The length from the crossing point to pair and trace, obtaining FWHM's.
node_joining_length: 7.0 # The distance in nanometres over which to join nearby crossing points.
node_extend_dist: 14.0 # The distance in nanometres over which to join nearby odd-branched nodes.
branch_pairing_length: 20.0 # The length in nanometres from the crossing point to pair and trace, obtaining FWHM's.
pair_odd_branches: false # Whether to try and pair odd-branched nodes. Options: true and false.
pad_width: 1 # Pixels to pad grains by when tracing (should be the same as disordered_tracing).
ordered_tracing:
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