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Updates smooth mask description
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MaxGamill-Sheffield committed Dec 11, 2024
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Expand Up @@ -58,6 +58,10 @@ mask pixels, and the gaussian smoothing better when there are small holes.
In addition, this smoothing step also tries to preserve mask topology by re-adding any holes back into the mask that lie
within the `holearea_min_max` threshold. This has the resulting effect of only smoothing the outer edge of the mask.

If required, the function can also take `null` values for both `dilation_iteration` and `gaussian_sigma` values to
return the original grain. This is useful for retaining the sample topology when the masking / segmentation is good
enough, for example when you use finely-trained deep learning models.

### 2. Skeletonisation

Skeletonisation is the process of reducing a binary image to a single-pixel wide representation. This can be done using
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