add back dependencies to env file

related to #41
ArcInstitute · Apr 6, 2024 · 96818de · 96818de
1 parent fce7f13
commit 96818de
Showing 1 changed file with 19 additions and 1 deletion.
diff --git a/docs/environment.yaml b/docs/environment.yaml
@@ -3,11 +3,29 @@ channels:
   - anaconda
   - conda-forge
 dependencies:
-  - python
+  - python=3.9
+  - scanpy
+  - python-igraph
+  - leidenalg
+  - pandas<2.0
+  - anndata
+  - numpy
+  - scipy
+  - matplotlib<3.7
+  - seaborn
+  - pyarrow
+  - ipykernel
+  - mscorefonts
+  - rust>=1.72
   - myst-parser=0.18.1
   - sphinx=5.3.0
   - sphinx_rtd_theme=1.1.1
   - sphinxcontrib-bibtex
   - pip
   - pip:
+      - click
+      - polars
+      - biobear
+      - numba
+      - pydeseq2
       - watermark