fixed formulas and typos #68
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name: build-github-pages | |
on: | |
push: | |
branches: | |
- main | |
# Allows you to run this workflow manually from the Actions tab | |
workflow_dispatch: | |
# Sets permissions of the GITHUB_TOKEN to allow deployment to GitHub Pages | |
permissions: | |
contents: write | |
pages: write | |
id-token: write | |
jobs: | |
build_rmarkdown_job: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Checkout repository | |
uses: actions/checkout@v4 | |
- name: Setup Mambaforge | |
uses: conda-incubator/setup-miniconda@v3 | |
with: | |
miniforge-variant: Mambaforge | |
miniforge-version: latest | |
activate-environment: rmarkdown-env | |
use-mamba: true | |
- name: Get Date | |
id: get-date | |
run: echo "today=$(/bin/date -u '+%Y%m%d')" >> $GITHUB_OUTPUT | |
shell: bash | |
- name: Cache Conda env | |
uses: actions/cache@v4 | |
with: | |
path: ${{ env.CONDA }}/envs | |
key: | |
conda-${{ runner.os }}--${{ runner.arch }}--${{steps.get-date.outputs.today }}-${{hashFiles('.github/envs/environment.yml') }}-${{ env.CACHE_NUMBER}} | |
env: | |
CACHE_NUMBER: 0 | |
id: cache | |
- name: Update environment | |
run: | |
mamba env update -n rmarkdown-env -f .github/envs/environment.yml | |
if: steps.cache.outputs.cache-hit != 'true' | |
- name: Render Rmd files | |
run: | | |
eval "$(conda shell.bash hook)" | |
conda activate rmarkdown-env | |
Rscript -e "rmarkdown::render_site()" | |
- name: Upload artifact | |
uses: actions/upload-pages-artifact@v3 | |
with: | |
# Upload entire repository | |
path: 'docs/' | |
- name: Deploy to GitHub Pages | |
id: deployment | |
uses: actions/deploy-pages@v4 |