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22 Open 14 Closed
22 Open 14 Closed
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Issues list

[Feature]: Add method to remove sequence match info from cigar enhancement feature-request
#90 opened Apr 9, 2023 by MillironX
1
Add a cigar method and BioAlignments.Alignment constructor for XAM.jl optimisation enhancement feature-request
#87 opened Oct 15, 2022 by CiaranOMara
Friendly request to @deprecate API changes via semver docs Things related to documentation enhancement
#84 opened Aug 24, 2022 by dehann
2
Refactor tests enhancement
#81 opened Jun 16, 2022 by kescobo
Weird error with AffineGapScoreModel()
#79 opened Jun 15, 2022 by jakobnissen
Alignment of 2 LongAminoAcidSeq with AffineGapScoreModel from docs goes out of bounds
#75 opened May 26, 2022 by kool7d
1
Extract start and end positions from a PairwiseAlignment feature-request
#73 opened Mar 28, 2022 by rohanmaddamsetti
1
AlignmentAnchor method signature
#69 opened Feb 12, 2022 by CiaranOMara
1
OP_BACK has no use?
#63 opened Jan 27, 2022 by jakobnissen
2
The API of accessing fields of BioAlignments
#58 opened Oct 26, 2021 by jakobnissen
What does the two integer fields in Alignment do?
#57 opened Oct 13, 2021 by jakobnissen
1
Get reference and query from PairwiseAlignment
#55 opened Jul 23, 2021 by jakobnissen
2
Inconsistent when aligning distinct sequence types
#54 opened Jul 19, 2021 by jakobnissen
1
Multiple alignment manipulation
#51 opened May 18, 2021 by BioTurboNick
3
Obscure error when aligning sequences with gaps
#46 opened Feb 15, 2021 by jakobnissen
How to get the score of two alignments?
#43 opened Sep 21, 2020 by aadimator
Sequence logo plots
#31 opened Jul 1, 2019 by cossio
1
Can't compiled by PackageCompile
#30 opened May 28, 2019 by aqzas
find() instead of findall() in hts-files.md
#28 opened Feb 6, 2019 by aalexandersson
LocalAlignment find lower score than biopython/scikit-bio implementations pinned
#27 opened Jan 17, 2019 by diegozea
5
Version trouble with IntervalTrees. Only able to install "BioAlignments" after removing package "Bio"
#17 opened Jun 30, 2018 by kopperud
1
Support the mpileup format
#16 opened Jun 25, 2018 by TransGirlCodes Version 0.4
@TransGirlCodes
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