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Issue 274: Add continuous benchmark structure #465

Issue 274: Add continuous benchmark structure

Issue 274: Add continuous benchmark structure #465

Triggered via pull request June 19, 2024 15:50
Status Success
Total duration 6m 49s
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document-EpiAware.yaml

on: pull_request
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Documentation: ../../../.julia/packages/Documenter/CJeWX/src/utilities/utilities.jl#L46
101 docstrings not included in the manual: EpiAware.EpiObsModels.NegativeBinomialMeanClust :: Tuple{Any, Any} EpiAware.EpiAwareBase.EpiAwareObservables EpiAware.EpiAwareBase.generate_latent :: Tuple{AbstractLatentModel, Any} EpiAware.EpiAwareBase._apply_method :: Union{Tuple{DynamicPPL.Model, ManyPathfinder}, Tuple{DynamicPPL.Model, ManyPathfinder, Any}} EpiAware.EpiAwareBase._apply_method :: Union{Tuple{DynamicPPL.Model, NUTSampler}, Tuple{DynamicPPL.Model, NUTSampler, Any}} EpiAware.EpiInfModels.R_to_r :: Union{Tuple{T}, Tuple{Any, Vector{T}}} where T<:AbstractFloat EpiAware.EpiAwareBase.generate_latent_infs :: Tuple{ExpGrowthRate, Any} EpiAware.EpiAwareBase.generate_latent_infs :: Tuple{AbstractTuringRenewal, Any} EpiAware.EpiAwareBase.generate_latent_infs :: Tuple{DirectInfections, Any} EpiAware.EpiAwareBase.AbstractEpiMethod EpiAware.EpiInfModels.EpiData EpiAware.EpiAwareBase.generated_observables :: Tuple{Any, Any, Any} EpiAware.EpiInference._run_manypathfinder :: Tuple{DynamicPPL.Model} EpiAware.EpiInfModels.neg_MGF :: Tuple{Any, AbstractVector} EpiAware.EpiAwareUtils EpiAware.EpiAwareBase.AbstractTuringObservationModel EpiAware.EpiAwareBase.AbstractTuringIntercept EpiAware.EpiLatentModels.AR EpiAware.EpiObsModels.generate_observation_kernel :: Tuple{Any, Any} EpiAware.EpiAwareBase.AbstractObservationModel EpiAware.EpiAwareBase.EpiMethod EpiAware.EpiAwareUtils.HalfNormal EpiAware.EpiInfModels.ExpGrowthRate EpiAware.EpiAwareBase.AbstractTuringLatentModel EpiAware.EpiAwareBase.AbstractEpiProblem EpiAware.EpiLatentModels EpiAware.EpiObsModels.StackObservationModels EpiAware.EpiLatentModels.RandomWalk EpiAware.EpiInfModels EpiAware.EpiLatentModels.RepeatEach EpiAware.EpiObsModels.PoissonError EpiAware.EpiLatentModels.CombineLatentModels EpiAware.EpiAwareBase.apply_method :: Tuple{Any, Any} EpiAware.EpiAwareBase.apply_method :: Tuple{Any, Any, Any} EpiAware.EpiAwareBase.apply_method :: Tuple{EpiProblem, AbstractEpiMethod, Any} EpiAware.EpiInfModels.DirectInfections EpiAware.EpiLatentModels.ConcatLatentModels EpiAware.EpiLatentModels.FixedIntercept EpiAware.EpiLatentModels.DiffLatentModel EpiAware.EpiInference EpiAware.EpiInference._apply_nuts :: Tuple{Any, Any, Pathfinder.PathfinderResult} EpiAware.EpiInference._apply_nuts :: Tuple{Any, Any, Any} EpiAware.EpiAwareBase.AbstractTuringEpiModel EpiAware.EpiObsModels.LatentDelay EpiAware.EpiObsModels.generate_observation_error_priors :: Tuple{AbstractTuringObservationErrorModel, Any, Any} EpiAware.EpiObsModels.generate_observation_error_priors :: Tuple{NegativeBinomialError, Any, Any} EpiAware.EpiInfModels.make_renewal_init :: Tuple{RenewalWithPopulation, Any, Any} EpiAware.EpiInfModels.make_renewal_init :: Tuple{Renewal, Any, Any} EpiAware.EpiInfModels.RenewalWithPopulation :: Tuple{Any, Any} EpiAware.EpiInfModels.RenewalWithPopulation EpiAware.EpiObsModels.Ascertainment EpiAware.EpiInference.NUTSampler EpiAware.EpiLatentModels.broadcast_dayofweek :: Tuple{AbstractTuringLatentModel} EpiAware.EpiAwareBase.broadcast_rule :: Tuple{AbstractBroadcastRule, Any, Any} EpiAware.EpiAwareBase.AbstractTuringObservationErrorModel EpiAware.EpiLatentModels.BroadcastLatentModel EpiAware.EpiInference._get_best_elbo_pathfinder :: Tuple{Any} EpiAware.EpiObsModels.ascertainment_dayofweek :: Tuple{AbstractTuringObservationModel} EpiAware.EpiAwareBase.EpiProblem EpiAware.EpiObsModels.NegativeBinomialError EpiAware.EpiAwareBase.condition_model :: Tuple{Any, Any, Any} EpiAware.EpiObsModels.observation_error :: Tuple{PoissonError, Any} EpiAware.EpiObsModels.observation_error :: Tuple{AbstractTuringObservationErrorModel, Any} EpiAware.EpiObsModels.observation_error :: Tuple{NegativeBinomialError, Any, Any} EpiAware.EpiLatentModels.HierarchicalNormal EpiAware.EpiInfModels.expected_Rt :: Tuple{EpiData, Vector{<:Real}} EpiAware.EpiInfMod
Documentation
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@4d4ae6ae148a43d0fd1eda1800170683e9882738, pyTooling/Actions/with-post-step@adef08d3bdef092282614f3b683897cefae82ee3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.