GitHub - CMorenoStokoe/network-mr-vis-tool: Visualisation tool for genetic epidemiologists to visualize network relationships in Mendelian randomization data

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Visualisation tool for genetic epidemiologists to visualize network relationships in Mendelian randomization data

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Name		Name	Last commit message	Last commit date
Latest commit History 104 Commits
css		css
img		img
scripts		scripts
webfonts		webfonts
.cpanel.yml		.cpanel.yml
.gitattributes		.gitattributes
LICENSE		LICENSE
MorenoStokoe2020_data.csv		MorenoStokoe2020_data.csv
MorenoStokoe2020_data_selection.csv		MorenoStokoe2020_data_selection.csv
ch3_fig1.csv		ch3_fig1.csv
ch3_fig_intro.csv		ch3_fig_intro.csv
ch3_fig_intro_1.csv		ch3_fig_intro_1.csv
ch3_fig_intro_2_dag.csv		ch3_fig_intro_2_dag.csv
ch3_fig_res_names.csv		ch3_fig_res_names.csv
ch3_fig_res_width.csv		ch3_fig_res_width.csv
debug.log		debug.log
exampleMRdata.csv		exampleMRdata.csv
exampleMRdata_colors.csv		exampleMRdata_colors.csv
exampleMRdata_delibratelyBroken.csv		exampleMRdata_delibratelyBroken.csv
exampleMRdata_icons.csv		exampleMRdata_icons.csv
exampleObsdata.csv		exampleObsdata.csv
index.html		index.html
readme.txt		readme.txt
visualisation.html		visualisation.html

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About:
The MR-Automatic Network Arranger (MiRANA) is a utility used to produce re-arrangable and customisable network visualisations for MR estimates.

Instructions:
1) First obtain new MR estimates using the MR Base estimate utility (requires R) OR populate a CSV file yourself (ensure the format is the same, see included CSV for reference)
2) Run the visualisation web file, follow instructions and upload your data
3) Arrange nodes in the graph as desired and screen shot the graph (e.g., by pressing PrtScn and pasting into paint or using the Snipping Tool utility which comes with Windows, or by pressing CMD + shift + 4 to screen grab on Apple OS)