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fix #11 #12

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fix #11 #12

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16 changes: 8 additions & 8 deletions src/TMEA/Plots.fs
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Original file line number Diff line number Diff line change
Expand Up @@ -377,10 +377,10 @@ module Plots =
fun (tmeaRes:TMEAResult) ->
let posDesc,negDesc =
tmeaRes.Characterizations.[constraintIndex].PositiveDescriptor
|> Array.find (fun x -> x.OntologyTerm = fasName)
|> Array.tryFind (fun x -> x.OntologyTerm = fasName)
,
tmeaRes.Characterizations.[constraintIndex].NegativeDescriptor
|> Array.find (fun x -> x.OntologyTerm = fasName)
|> Array.tryFind (fun x -> x.OntologyTerm = fasName)

let posPValCorrected , negPValCorrected =
tmeaRes.Characterizations.[constraintIndex].PositiveDescriptor
Expand All @@ -398,8 +398,8 @@ module Plots =
let qv = Testing.MultipleTesting.Qvalues.ofPValues pi0 pv
Array.zip id qv
|> List.ofArray
|> List.find (fun (id,pVal) -> id = fasName)
|> snd
|> List.tryFind (fun (id,pVal) -> id = fasName)
|> fun t -> if t.IsSome then t.Value |> snd else 1.
,
tmeaRes.Characterizations.[constraintIndex].NegativeDescriptor
|> Array.map (fun x -> x.OntologyTerm,x.PValue)
Expand All @@ -416,8 +416,8 @@ module Plots =
let qv = Testing.MultipleTesting.Qvalues.ofPValues pi0 pv
Array.zip id qv
|> List.ofArray
|> List.find (fun (id,pVal) -> id = fasName)
|> snd
|> List.tryFind (fun (id,pVal) -> id = fasName)
|> fun t -> if t.IsSome then t.Value |> snd else 1.

let isSigPos,isSigNeg =
posPValCorrected < alphaLevel,
Expand Down Expand Up @@ -477,7 +477,7 @@ module Plots =
Align=StyleParam.AnnotationAlignment.Left,
Text =(
let binDataText = (
sprintf "<br></br><b>BinSize</b>: %i<br></br><b>WeightSum</b>: %.5f<br></br><b>PVal</b>: %.5f<br></br><b>CorrectedPVal</b>: %.5f<br></br>" posDesc.BinSize posDesc.WeightSum posDesc.PValue posPValCorrected)
sprintf "<br></br><b>BinSize</b>: %i<br></br><b>WeightSum</b>: %.5f<br></br><b>PVal</b>: %.5f<br></br><b>CorrectedPVal</b>: %.5f<br></br>" (if posDesc.IsSome then posDesc.Value.BinSize else 0) (if posDesc.IsSome then posDesc.Value.WeightSum else 0.) (if posDesc.IsSome then posDesc.Value.PValue else 1.) posPValCorrected)
let header=
if isSigPos then
(sprintf "[+]<b>Significant(@%.5f)</b> in C%i" alphaLevel constraintIndex)
Expand All @@ -502,7 +502,7 @@ module Plots =
BorderColor=Color.fromString "ashgray",
Align=StyleParam.AnnotationAlignment.Left,
Text= (
let binDataText = (sprintf "<br></br><b>BinSize</b>: %i<br></br><b>WeightSum</b>: %.5f<br></br><b>PVal</b>: %.5f<br></br><b>CorrectedPVal</b>: %.5f<br></br>" negDesc.BinSize negDesc.WeightSum negDesc.PValue negPValCorrected)
let binDataText = (sprintf "<br></br><b>BinSize</b>: %i<br></br><b>WeightSum</b>: %.5f<br></br><b>PVal</b>: %.5f<br></br><b>CorrectedPVal</b>: %.5f<br></br>" (if negDesc.IsSome then negDesc.Value.BinSize else 0) (if negDesc.IsSome then negDesc.Value.WeightSum else 0.) (if negDesc.IsSome then negDesc.Value.PValue else 1.) negPValCorrected)
let header=
if isSigNeg then
(sprintf "[-]<b>Significant</b> in C%i" constraintIndex)
Expand Down