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scalable construction and optimization of kinetic transport systems for E. coli

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CovertLab/EvolveTransport

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main.py drives configure_search.py configures the reactions, creates a kinetic model and fitness evaluation, and runs a genetic algorithm to optimizes model fitness. Finally, it visualizes the evolution and resulting model.

Execution:

python source/main.py

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scalable construction and optimization of kinetic transport systems for E. coli

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