Merge branch 'main' into dev #85
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Python Package using Conda | |
| env: | |
| CIBW_TEST_REQUIRES: pytest | |
| CIBW_TEST_COMMAND: "pytest tests" | |
| on: [push] | |
| jobs: | |
| build-linux: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| max-parallel: 5 | |
| matrix: | |
| python-version: ["3.10"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: true | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| mamba-version: "*" | |
| channels: conda-forge | |
| channel-priority: true | |
| activate-environment: tyssue | |
| environment-file: environment.yml | |
| - name: install tyssue github action | |
| shell: bash -l {0} | |
| run: pip install -v .[dev] | |
| - name: Lint with flake8 | |
| shell: bash -l {0} | |
| run: | | |
| mamba install flake8 | |
| # stop the build if there are Python syntax errors or undefined names | |
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: Test with pytest | |
| shell: bash -l {0} | |
| run: | | |
| mamba install pytest | |
| make test |