Update endpoint lgd-publication to support extra data #43

	name: G2P API tests

	on: [pull_request]

	permissions:
	contents: read
	actions: read

	jobs:
	test:
	runs-on: ubuntu-latest
	services:
	mysql:
	image: mysql:8.0
	env:
	MYSQL_ROOT_PASSWORD: root
	MYSQL_DATABASE: test_db
	ports:
	- 3306:3306
	options: >-
	--health-cmd="mysqladmin ping -h localhost" --health-interval=10s
	--health-timeout=5s --health-retries=3

	steps:
	- name: Checkout code
	uses: actions/checkout@v2

	- name: Change to the root directory
	run: cd /home/runner/work

	- name: Set up Python
	uses: actions/setup-python@v2
	with:
	python-version: '3.10'

	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install -r requirements.txt

	- name: Create project config file
	run: \|
	echo "# config.ini" > /home/runner/work/config.ini
	echo "[database]" >> /home/runner/work/config.ini
	echo "name=test_db" >> /home/runner/work/config.ini
	echo "user=root" >> /home/runner/work/config.ini
	echo "password=root" >> /home/runner/work/config.ini
	echo "host=127.0.0.1" >> /home/runner/work/config.ini
	echo "port=3306" >> /home/runner/work/config.ini

	- name: Run Tests
	run: \|
	export SECRET_KEY=$(openssl rand -base64 12)
	python manage.py makemigrations
	python manage.py migrate
	python manage.py test gene2phenotype_app.tests
	env:
	PROJECT_CONFIG_PATH: /home/runner/work/config.ini
	working-directory: gene2phenotype_project

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