Skip to content

Commit

Permalink
Update CHANGELOG.md
Browse files Browse the repository at this point in the history
  • Loading branch information
aricht authored Sep 11, 2023
1 parent 40e7d56 commit c03a70f
Showing 1 changed file with 6 additions and 4 deletions.
10 changes: 6 additions & 4 deletions CHANGELOG.md
Original file line number Diff line number Diff line change
@@ -1,5 +1,11 @@
# Changelog

## [1.0.3] - 2022-08-21

### Changed
- Give cellranger ADT and cellranger GEX rule the number of threads specified in the config file (`--localcores`).
- in script `analyse_citeseq.R` have new parameter `--number_pca_adt`. With this parameter in the config file the number of PCA dimensions used for the UMAP calculation based on ADT counts can be adjusted. The number of PCA dimensions cannot be larger than the number of ADTs in the experiment at hand, otherwise the script fails.

## [1.0.2] - 2023-03-22
- Update version of scAmpi that is used as a module. scAmpi v2.0.7 contains fixes regarding R package discrepancies that caused various scripts to fail (using `ggsave` function).

Expand All @@ -14,8 +20,4 @@

First full, publicly available version of the gExcite analysis pipeline.

## [1.0.1] - 2022-08-21

### Changed
- Give cellranger ADT and cellranger GEX rule the number of threads specified in the config file (`--localcores`).
- in script `analyse_citeseq.R` have new parameter `--number_pca_adt`. With this parameter in the config file the number of PCA dimensions used for the UMAP calculation based on ADT counts can be adjusted. The number of PCA dimensions cannot be larger than the number of ADTs in the experiment at hand, otherwise the script fails.

0 comments on commit c03a70f

Please sign in to comment.