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Pull requests: Ensembl/ensembl-vep

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Pull requests list

Allow https download and GITHUB_TOKEN in VEP Install
#1805 opened Nov 28, 2024 by nakib103 Loading…
Force set --offline if no database setup
#1797 opened Nov 19, 2024 by nakib103 Loading…
@likhitha-surapaneni
Add new option to fetch clinvar somatic classification + patch db for 115 e115
#1794 opened Nov 18, 2024 by dglemos Loading…
5 tasks done
@nakib103
1
Remove dependency on non indexed cache
#1770 opened Oct 18, 2024 by likhitha-surapaneni Loading…
@dglemos
Capture uploaded allele correctly for VCF input
#1744 opened Aug 20, 2024 by likhitha-surapaneni Loading…
2 tasks
@nakib103
9
Add pick_count option - number of results to return by pick
#1733 opened Aug 7, 2024 by nakib103 • Draft
@nuno-agostinho
Remove redundant symbolic alt to so term hash e114
#1643 opened Mar 21, 2024 by nakib103 Loading…
@dglemos
5
Support NCBI microbe GTF/GFF with no transcripts (CDS only)
#1627 opened Mar 4, 2024 by nuno-agostinho Loading…
2 of 4 tasks
@likhitha-surapaneni
adding to the stats on hold
#1560 opened Nov 20, 2023 by dbolser Loading…
@nuno-agostinho
7
feat: update of dockerfile to use more secure image; on hold
#1546 opened Nov 2, 2023 by mvforster Loading…
@nakib103
1
Fix results when enabling --no_stats on hold
#1427 opened Jun 2, 2023 by nuno-agostinho • Draft
@jamie-m-a
1
ProTip! Adding no:label will show everything without a label.