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# Resources that have not been sent out

## RDM
- https://handbook.datalad.org/en/latest/basics/101-127-yoda.html
- https://dans.knaw.nl/en/training-faq/

## Peer review
- https://www.youtube.com/watch?v=JIVkdnsC-oA
- https://northwestern.zoom.us/rec/play/CePfoZrNscQT5HdIG9eBmFXxdsa1tDMmN9_vnMj44DL45OP_aeRXoz2dp1OjGNQlsgnwelk-hX5wwigA.o7hYO9CJDlgJ_DLS?canPlayFromShare=true&from=share_recording_detail&continueMode=true&componentName=rec-play&originRequestUrl=https%3A%2F%2Fnorthwestern.zoom.us%2Frec%2Fshare%2FwagvyJv6Y8IXqgYa-rQjWy826hxIt5z4Co_cvILEV1lCv4MrlWkFkNlw1s5W9kfU.TbA3SUluZ_bPiMrV (starting from 8:30) + link to PREreview resources

## Start/improve coding skills
- Software citation: https://youtu.be/vtjAN5T1bGs
- https://datascience.nih.gov/tools-and-analytics/best-practices-for-sharing-research-software-faq (more valuable to adapt to local tu delft context)
- Sharing ML data: https://huggingface.co/blog/researcher-dataset-sharing
- https://blog.esciencecenter.nl/how-to-ensure-that-others-can-run-your-code-4c7672524a69
- Add somewhere? Make: https://tilburgsciencehub.com/topics/automation/automation-tools/makefiles/make/ (plus other posts on the tilburg hub)
- https://www.tomwagg.com/software-citation-station/
- R but also more widely applicable: Stop Making Spaghetti (Code) - Nicola Rennie https://www.youtube.com/watch?v=wbhWl5-xR10
- https://opensource.guide/how-to-contribute/#communicating-effectively
- https://trufflesecurity.com/blog/anyone-can-access-deleted-and-private-repo-data-github
- https://research-software-directory.org/software/bestietemplatejl
- https://www.theregister.com/2024/08/08/anaconda_puts_the_squeeze_on/ * what can be be done about it: https://prefix.dev/blog/towards_a_vendor_lock_in_free_conda_experience
- [email protected] - is your software already listed in the Dutch Research Software Directory? Isn't it fun seeing the flow of #opensource releases every week? https://research-software-directory.org/organisations/maastricht-university?tab=releases

## Copyright
- https://www.coalition-s.org/blog/exclusive-licence-to-publish-now-heres-a-thing/ (copy right transfer & NC-ND license)

## Reproducibility
- quality or reproducibility: https://www.nature.com/articles/d42473-019-00004-y
- https://doi.org/10.5281/zenodo.12744715

## Integrity:
- NRIN Happy Hour - The Ethics of Using AI in Research https://www.youtube.com/watch?v=hFwNmfmLDaw&t=1937s
- Decolonised research culture and practice https://www.youtube.com/watch?v=-GsO3XCPR3c
- https://retractionwatch.com/2024/07/16/kavli-prize-winner-threatens-to-sue-critic-for-defamation/
- https://www.nplusonemag.com/issue-34/essays/sexism-in-the-academy/

## Other
- [https://www.jahid-hasan.com/writings/a-complete-learning-path-for-cfd/](https://www.jahid-hasan.com/writings/a-complete-learning-path-for-cfd/)
- Russo, L., & Petropoulou Ionescu, D. (2024). The helpers, the doers, and the ones left behind: Reflections on the gendered dimension of academic citizenship in Dutch academia. Journal of Praxis in Higher Education, 6(2), 101-121. https://doi.org/10.47989/kpdc491
- Environmental impact of data processing: https://embl-ebi.cloud.panopto.eu/Panopto/Pages/Viewer.aspx?id=16c22250-ef3e-41e8-ba5d-af50010c7c0c
- https://genomic.social/@geertvangeest/110038775679758995 Do you want to find all this awesome training materials on GitHub and GitLab? Check out #Glittr (https://glittr.org): a nice web app that lets you search and compare #bioinformatics courses by topic, popularity and recency. 🚀 Whether you want to learn new skills or reuse existing materials in your own courses, Glittr.org has you covered. 😎 Check it out and share your feedback with us! 💬
- https://elephantinthelab.org/the-potential-impact-of-ai-on-the-individual-research-process-and-science-in-general/
- https://www.rug.nl/library/open-access/blog/take-back-control-of-research-communication-embrace-mastodon

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