gin

Description

Annotate arbitrary genome intervals with genes and carry out functional enrichment analysis with Monte Carlo test.

Authors

Bernhard Haubold and Beatriz Vieira Mourato

Make the Programs

If you are on an Ubuntu system like Ubuntu on wsl under MS-Windows or the Ubuntu Docker container, you can clone the repository and change into it.

git clone https://github.com/evolbioinf/gin
cd gin

Then install the additional dependencies by running the script setup.sh.

bash scripts/setup.sh

Make the programs.

make

The directory bin now contains the binaries. You can also download example data into the directory data and test the programs on it.

make test