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  1. MIC-DKFZ/nnUNet MIC-DKFZ/nnUNet Public

    Python 6k 1.8k

  2. MIC-DKFZ/batchgenerators MIC-DKFZ/batchgenerators Public

    A framework for data augmentation for 2D and 3D image classification and segmentation

    Jupyter Notebook 1.1k 223

  3. BatchViewer BatchViewer Public

    A tool to do quick and dirty inspection of multichannel 3D data. I use it mainly to visualize batches for deep learning.

    Python 51 6

  4. MIC-DKFZ/ACDC2017 MIC-DKFZ/ACDC2017 Public

    Python 55 15

  5. MIC-DKFZ/BraTS2017 MIC-DKFZ/BraTS2017 Public

    Python 75 16

  6. MIC-DKFZ/HD-BET MIC-DKFZ/HD-BET Public

    MRI brain extraction tool

    Python 285 65