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Ordinal regression docs (bambinos#719)
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* ordinal model with cumulative link notebook

* ordinal model with cumulative link function

ordinal models (cumulative and sratio)

* unified explanation for cumulative and sequential models

* sratio model and data

* code review changes

* remove intercept in models

* zero mu vector prior for sratio family

* code review and add section on default priors

* explicit explanation of K and k and added summary section

* Zero inflated docs (bambinos#725)

* zero inflated poisson and hurdle poisson models

* grammar fix and sort imports

* interpret coeff. and model comparison section

* code review changes

* change wording in hurdle Poisson section

* change posterior predictive bins to use np.arange

* ordinal model with cumulative link function

ordinal models (cumulative and sratio)

* use plot_ppc_discrete for posterior predictive samples

* add plots explaining the ordinal outcome of the dataset

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Co-authored-by: Gabriel Stechschulte <[email protected]>
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GStechschulte and Gabriel Stechschulte committed Oct 3, 2023
1 parent 8bf685e commit 976709c
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2 changes: 1 addition & 1 deletion bambi/priors/scaler.py
Original file line number Diff line number Diff line change
Expand Up @@ -114,7 +114,7 @@ def scale_threshold(self):
threshold = self.model.components["threshold"]
if isinstance(threshold, ConstantComponent) and threshold.prior.auto_scale:
response_level_n = len(np.unique(self.response_component.response_term.data))
mu = np.round(np.linspace(-2, 2, num=response_level_n - 1), 2)
mu = np.zeros(response_level_n - 1)
threshold.prior = Prior("Normal", mu=mu, sigma=1)

def scale(self):
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