On request added the enzyme AvaII

GenomicsCoreLeuven · Jun 24, 2015 · 4278e2d · 4278e2d
1 parent 61d70d5
commit 4278e2d
Show file tree

Hide file tree

Showing 6 changed files with 387 additions and 2 deletions.
diff --git a/README.md b/README.md
@@ -256,4 +256,7 @@ v1.1.1
 
 v1.1.2
 * Updated barcode recognition for single read modus in the demultiplexer: when a read can be assigned to multiple samples, 
-the read is considered as unvalid (previous was first sample)
+the read is considered as unvalid (previous was first sample)
+
+v1.1.3
+* On request added the enzyme AvaII
diff --git a/releases/GBSX_v1.1.3/GBSX_digest_v1.0.pl b/releases/GBSX_v1.1.3/GBSX_digest_v1.0.pl
diff --git a/releases/latest/GBSX_v1.1.2.jar → releases/GBSX_v1.1.3/GBSX_v1.1.3.jar b/releases/latest/GBSX_v1.1.2.jar → releases/GBSX_v1.1.3/GBSX_v1.1.3.jar
diff --git a/releases/latest/GBSX_v1.1.3.jar b/releases/latest/GBSX_v1.1.3.jar
diff --git a/src/be/uzleuven/gc/logistics/GBSX/GBSX.java b/src/be/uzleuven/gc/logistics/GBSX/GBSX.java
@@ -35,7 +35,7 @@
 public class GBSX {
 
     public static final boolean DEBUG = false;
-    public final static String VERSION = "GBSX v1.1.2";
+    public final static String VERSION = "GBSX v1.1.3";
     private final static String LICENCE = "GPLv3";
 
     /**

diff --git a/src/be/uzleuven/gc/logistics/GBSX/utils/enzyme/model/EnzymeEnum.java b/src/be/uzleuven/gc/logistics/GBSX/utils/enzyme/model/EnzymeEnum.java
@@ -79,6 +79,8 @@ public enum EnzymeEnum implements Enzyme{
 
     NSPI ("NspI", new String[]{"CATGT", "CATGC"}),
 
+    AVAII ("AvaII", new String[]{"GACC", "GTCC"}),
+
     NAN ("NA", new String[]{""});
 
     private final String name;