Popular repositories Loading

1. phase-retrieval phase-retrieval Public

   A small library implementing phase retrieval algorithms for 2D images.

   Jupyter Notebook 24 10

2. colav colav Public

   Calculate protein structural representations (dihedral angles, CA pairwise distances, and strain analysis) for downstream analysis (e.g., PCA, t-SNE, or UMAP).

   Jupyter Notebook 8 1

3. mdtools mdtools Public

   Tools for running MD simulations in OpenMM

   Python 6 2

4. scientific-python-bootcamp scientific-python-bootcamp Public

   Notebooks from a three day introduction to scientific computing in python at Harvard University.

   Jupyter Notebook 3 2

5. SFcalculator SFcalculator Public

   3 1

6. microutil microutil Public

   Python utils for working microscopy datasets

   Python 2 2