First release of code and data to reproduce analyses for the manuscript "A systems serology analysis of correlates of protection against cholera" by Kirsten E. Wiens, Anita S. Iyer, Taufiqur R. Bhuiyan, Lenette L. Lu, Deniz Cizmeci, Matthew J. Gorman, Dansu Yuan, Rachel L. Becker, Edward T. Ryan, Stephen B. Calderwood, Regina C. LaRocque, Fahima Chowdhury, Ashraful I. Khan, Myron M. Levine, Wilbur H. Chen, Richelle C. Charles, Andrew S. Azman, Firdausi Qadri, Galit Alter, Jason B. Harris.