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update links in template
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crvernon committed Apr 14, 2021
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Expand Up @@ -48,16 +48,16 @@ Human, I.M. (2021). My output dataset name [Data set]. DataHub. https://doi.org/
Fill in detailed info here or link to other documentation that is a thorough walkthrough of how to use what is in this repository to reproduce your experiment.


1. Install the software components required to conduct the experiement from [Contributing modeling software](#Contributing modeling software)
2. Download and install the supporting input data required to conduct the experiement from [Input data](#Input data)
1. Install the software components required to conduct the experiement from [Contributing modeling software](#contributing-modeling-software)
2. Download and install the supporting input data required to conduct the experiement from [Input data](#input-data)
3. Run the following scripts in the `workflow` directory to re-create this experiment:

| Script Name | Description | How to Run |
| --- | --- | --- |
| `step_one.py` | Script to run the first part of my experiment | `python3 step_one.py -f /path/to/inputdata/file_one.csv` |
| `step_two.py` | Script to run the last part of my experiment | `python3 step_two.py -o /path/to/my/outputdir` |

4. Download and unzip the output data from my experiment [Output data](#Output data)
4. Download and unzip the output data from my experiment [Output data](#output-data)
5. Run the following scripts in the `workflow` directory to compare my outputs to those from the publication

| Script Name | Description | How to Run |
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