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Richard Lane
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Dec 10, 2024
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,65 +1,65 @@ | ||
| # When slicing the array the Z value refers to one beyond the last slice,,,, | ||
| # i.e. access the last image to keep with array[z-1]; when slicing a volume from the array,,,, | ||
| # use array[z-d:z],,,, | ||
| # NB: for training set 3 (where we don't crop around the centre), I've accidentally defined,,, | ||
| # The x and y axes backwards, or something. Whoops,,, | ||
| n,z,x,y,crop_around_centre,age | ||
| 30,1435,161,390,True,12.0 | ||
| 31,1350,409,243,True,12.0 | ||
| 39,1414,222,311,True,7.0 | ||
| 50,1262,333,243,True,4.0 | ||
| 51,1636,301,403,True,4.0 | ||
| 54,1485,426,159,True,4.0 | ||
| 58,1436,269,172,True,30.0 | ||
| 69,1512,352,193,True,12.0 | ||
| 340,1497,388,358,True,18.0 | ||
| 341,1400,246,271,True,18.0 | ||
| 343,1767,277,261,True,18.0 | ||
| 57,1600,326,189,True,30.0 | ||
| 59,1549,141,403,True,30.0 | ||
| 60,1716,289,280,True,30.0 | ||
| 82,1719,163,334,True,36.0 | ||
| 83,1603,162,184,True,36.0 | ||
| 84,1734,406,235,True,36.0 | ||
| 85,1589,315,250,True,36.0 | ||
| 86,1524,239,211,True,36.0 | ||
| 107,1778,305,360,True,18.0 | ||
| 116,1760,351,190,True,8.0 | ||
| 117,1750,346,280,True,8.0 | ||
| 118,1782,334,261,True,8.0 | ||
| 131,1549,292,360,True,30.0 | ||
| 133,1533,284,417,True,30.0 | ||
| 135,1482,268,350,True,30.0 | ||
| 139,1443,186,289,True,24.0 | ||
| 167,1277,295,219,True,4.0 | ||
| 168,1566,494,419,True,4.0 | ||
| 169,1619,324,390,True,4.0 | ||
| 193,1443,330,399,True,12.0 | ||
| 216,1638,315,325,True,18.0 | ||
| 220,1390,175,235,True,24.0 | ||
| 230,1389,260,347,True,28.0 | ||
| 246,1636,184,307,True,14.0 | ||
| 247,1714,432,285,True,14.0 | ||
| 248,1725,370,327,True,14.0 | ||
| 249,1618,302,261,True,14.0 | ||
| 250,1679,327,323,True,14.0 | ||
| 291,1482,248,279,True,12.0 | ||
| 351,1667,326,276,True,3.0 | ||
| 401,1375,330,449,True,12.0 | ||
| 420,1290,204,370,True,12.0 | ||
| 441,1836,339,458,True,10.0 | ||
| 93,1621,174,198,False,36.0 | ||
| 68,1558,372,335,False,12.0 | ||
| 53,1503,233,283,False,4.0 | ||
| 186,1651,435,423,False,18.0 | ||
| 2,1712,325,302,False,24.0 | ||
| 52,1693,429,209,False,4.0 | ||
| 26,1566,465,169,False,18.0 | ||
| 4,1638,481,489,False,24.0 | ||
| 25,1531,430,462,False,18.0 | ||
| 185,1714,323,268,False,18.0 | ||
| 91,1464,411,311,False,36.0 | ||
| 38,1606,487,318,False,7.0 | ||
| 3,1679,370,449,False,24.0 | ||
| 37,1722,423,425,False,7.0 | ||
| 1,1649,425,386,False,24.0 | ||
| # When slicing the array the Z value refers to one beyond the last slice,,,,,,, | ||
| # i.e. access the last image to keep with array[z-1]; when slicing a volume from the array,,,,,,, | ||
| # use array[z-d:z],,,,,,, | ||
| # NB: for training set 3 (where we don't crop around the centre), I've accidentally defined,,,,,, | ||
| # The x and y axes backwards, or something. Whoops,,,,,, | ||
| n,z,x,y,crop_around_centre,age,genotype,strain | ||
| 30,1435,161,390,True,12.0,wt,wt | ||
| 31,1350,409,243,True,12.0,wt,wt | ||
| 39,1414,222,311,True,7.0,wt,wt | ||
| 50,1262,333,243,True,4.0,wt,wt | ||
| 51,1636,301,403,True,4.0,wt,wt | ||
| 54,1485,426,159,True,4.0,wt,wt | ||
| 58,1436,269,172,True,30.0,wt,wt | ||
| 69,1512,352,193,True,12.0,wt,wt | ||
| 340,1497,388,358,True,18.0,wt,wt | ||
| 341,1400,246,271,True,18.0,wt,wt | ||
| 343,1767,277,261,True,18.0,wt,wt | ||
| 57,1600,326,189,True,30.0,wt,wt | ||
| 59,1549,141,403,True,30.0,wt,wt | ||
| 60,1716,289,280,True,30.0,wt,wt | ||
| 82,1719,163,334,True,36.0,wt,wt | ||
| 83,1603,162,184,True,36.0,wt,wt | ||
| 84,1734,406,235,True,36.0,wt,wt | ||
| 85,1589,315,250,True,36.0,wt,wt | ||
| 86,1524,239,211,True,36.0,wt,wt | ||
| 107,1778,305,360,True,18.0,hom,arid1b | ||
| 116,1760,351,190,True,8.0,hom,panther | ||
| 117,1750,346,280,True,8.0,hom,panther | ||
| 118,1782,334,261,True,8.0,hom,panther | ||
| 131,1549,292,360,True,30.0,het,chst11 | ||
| 133,1533,284,417,True,30.0,wt,chst11 | ||
| 135,1482,268,350,True,30.0,wt,chst11 | ||
| 139,1443,186,289,True,24.0,het,chst11 | ||
| 167,1277,295,219,True,4.0,mosaic,ncoa3 | ||
| 168,1566,494,419,True,4.0,mosaic,ncoa3 | ||
| 169,1619,324,390,True,4.0,mosaic,ncoa3 | ||
| 193,1443,330,399,True,12.0,hom,mcf2l | ||
| 216,1638,315,325,True,18.0,wt,dot1 | ||
| 220,1390,175,235,True,24.0,wt,wt | ||
| 230,1389,260,347,True,28.0,het,col9 | ||
| 246,1636,184,307,True,14.0,het,sp7 | ||
| 247,1714,432,285,True,14.0,het,sp7 | ||
| 248,1725,370,327,True,14.0,het,sp7 | ||
| 249,1618,302,261,True,14.0,het,sp7 | ||
| 250,1679,327,323,True,14.0,het,sp7 | ||
| 291,1482,248,279,True,12.0,het,col11a2 | ||
| 351,1667,326,276,True,3.0,hom,wnt16 | ||
| 401,1375,330,449,True,12.0,mosaic,ctsk | ||
| 420,1290,204,370,True,12.0,hom,col11a2 | ||
| 441,1836,339,458,True,10.0,het,irf6 | ||
| 93,1621,174,198,False,36.0,wt,wt | ||
| 68,1558,372,335,False,12.0,wt,wt | ||
| 53,1503,233,283,False,4.0,wt,wt | ||
| 186,1651,435,423,False,18.0,186,barx1 | ||
| 2,1712,325,302,False,24.0,wt,wt | ||
| 52,1693,429,209,False,4.0,wt,wt | ||
| 26,1566,465,169,False,18.0,het,barx1 | ||
| 4,1638,481,489,False,24.0,wt,wt | ||
| 25,1531,430,462,False,18.0,het,barx1 | ||
| 185,1714,323,268,False,18.0,wt,barx1 | ||
| 91,1464,411,311,False,36.0,wt,wt | ||
| 38,1606,487,318,False,7.0,wt,wt | ||
| 3,1679,370,449,False,24.0,wt,wt | ||
| 37,1722,423,425,False,7.0,wt,wt | ||
| 1,1649,425,386,False,24.0,wt,wt |