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update version etc in docs #289

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155 changes: 108 additions & 47 deletions docs/Manifest.toml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -7,6 +7,7 @@ version = "0.0.1"

[[ArgTools]]
uuid = "0dad84c5-d112-42e6-8d28-ef12dabb789f"
version = "1.1.1"

[[Artifacts]]
uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"
Expand All @@ -15,80 +16,91 @@ uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33"
uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"

[[ChainRulesCore]]
deps = ["Compat", "LinearAlgebra", "SparseArrays"]
git-tree-sha1 = "f885e7e7c124f8c92650d61b9477b9ac2ee607dd"
deps = ["Compat", "LinearAlgebra"]
git-tree-sha1 = "e0af648f0692ec1691b5d094b8724ba1346281cf"
uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
version = "1.11.1"
version = "1.18.0"
weakdeps = ["SparseArrays"]

[ChainRulesCore.extensions]
ChainRulesCoreSparseArraysExt = "SparseArrays"

[[ChainRulesTestUtils]]
deps = ["ChainRulesCore", "Compat", "FiniteDifferences", "LinearAlgebra", "Random", "Test"]
deps = ["ChainRulesCore", "Compat", "FiniteDifferences", "LinearAlgebra", "Random", "Suppressor", "Test"]
path = ".."
uuid = "cdddcdb0-9152-4a09-a978-84456f9df70a"
version = "1.2.4"
version = "1.13.0"

[[Compat]]
deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "SHA", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"]
git-tree-sha1 = "dce3e3fea680869eaa0b774b2e8343e9ff442313"
deps = ["UUIDs"]
git-tree-sha1 = "886826d76ea9e72b35fcd000e535588f7b60f21d"
uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
version = "3.40.0"
version = "4.10.1"
weakdeps = ["Dates", "LinearAlgebra"]

[Compat.extensions]
CompatLinearAlgebraExt = "LinearAlgebra"

[[CompilerSupportLibraries_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae"
version = "1.0.5+0"

[[Dates]]
deps = ["Printf"]
uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"

[[DelimitedFiles]]
deps = ["Mmap"]
uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab"

[[Distributed]]
deps = ["Random", "Serialization", "Sockets"]
uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"

[[DocStringExtensions]]
deps = ["LibGit2"]
git-tree-sha1 = "b19534d1895d702889b219c382a6e18010797f0b"
git-tree-sha1 = "2fb1e02f2b635d0845df5d7c167fec4dd739b00d"
uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae"
version = "0.8.6"
version = "0.9.3"

[[Documenter]]
deps = ["ANSIColoredPrinters", "Base64", "Dates", "DocStringExtensions", "IOCapture", "InteractiveUtils", "JSON", "LibGit2", "Logging", "Markdown", "REPL", "Test", "Unicode"]
git-tree-sha1 = "f425293f7e0acaf9144de6d731772de156676233"
git-tree-sha1 = "39fd748a73dce4c05a9655475e437170d8fb1b67"
uuid = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
version = "0.27.10"
version = "0.27.25"

[[Downloads]]
deps = ["ArgTools", "LibCURL", "NetworkOptions"]
deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"]
uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6"
version = "1.6.0"

[[FileWatching]]
uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee"

[[FiniteDifferences]]
deps = ["ChainRulesCore", "LinearAlgebra", "Printf", "Random", "Richardson", "StaticArrays"]
git-tree-sha1 = "c56a261e1a5472f20cbd7aa218840fd203243319"
deps = ["ChainRulesCore", "LinearAlgebra", "Printf", "Random", "Richardson", "SparseArrays", "StaticArrays"]
git-tree-sha1 = "d77e4697046989f44dce3ed66269aaf1611a3406"
uuid = "26cc04aa-876d-5657-8c51-4c34ba976000"
version = "0.12.19"
version = "0.12.31"

[[IOCapture]]
deps = ["Logging", "Random"]
git-tree-sha1 = "f7be53659ab06ddc986428d3a9dcc95f6fa6705a"
git-tree-sha1 = "d75853a0bdbfb1ac815478bacd89cd27b550ace6"
uuid = "b5f81e59-6552-4d32-b1f0-c071b021bf89"
version = "0.2.2"
version = "0.2.3"

[[InteractiveUtils]]
deps = ["Markdown"]
uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240"

[[JSON]]
deps = ["Dates", "Mmap", "Parsers", "Unicode"]
git-tree-sha1 = "8076680b162ada2a031f707ac7b4953e30667a37"
git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a"
uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
version = "0.21.2"
version = "0.21.4"

[[LibCURL]]
deps = ["LibCURL_jll", "MozillaCACerts_jll"]
uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21"
version = "0.6.3"

[[LibCURL_jll]]
deps = ["Artifacts", "LibSSH2_jll", "Libdl", "MbedTLS_jll", "Zlib_jll", "nghttp2_jll"]
uuid = "deac9b47-8bc7-5906-a0fe-35ac56dc84c0"
version = "7.84.0+0"

[[LibGit2]]
deps = ["Base64", "NetworkOptions", "Printf", "SHA"]
Expand All @@ -97,12 +109,13 @@ uuid = "76f85450-5226-5b5a-8eaa-529ad045b433"
[[LibSSH2_jll]]
deps = ["Artifacts", "Libdl", "MbedTLS_jll"]
uuid = "29816b5a-b9ab-546f-933c-edad1886dfa8"
version = "1.10.2+0"

[[Libdl]]
uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb"

[[LinearAlgebra]]
deps = ["Libdl"]
deps = ["Libdl", "OpenBLAS_jll", "libblastrampoline_jll"]
uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"

[[Logging]]
Expand All @@ -115,25 +128,46 @@ uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"
[[MbedTLS_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1"
version = "2.28.2+0"

[[Mmap]]
uuid = "a63ad114-7e13-5084-954f-fe012c677804"

[[MozillaCACerts_jll]]
uuid = "14a3606d-f60d-562e-9121-12d972cd8159"
version = "2022.10.11"

[[NetworkOptions]]
uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
version = "1.2.0"

[[OpenBLAS_jll]]
deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"]
uuid = "4536629a-c528-5b80-bd46-f80d51c5b363"
version = "0.3.21+4"

[[Parsers]]
deps = ["Dates"]
git-tree-sha1 = "ae4bbcadb2906ccc085cf52ac286dc1377dceccc"
deps = ["Dates", "PrecompileTools", "UUIDs"]
git-tree-sha1 = "a935806434c9d4c506ba941871b327b96d41f2bf"
uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
version = "2.1.2"
version = "2.8.0"

[[Pkg]]
deps = ["Artifacts", "Dates", "Downloads", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"]
deps = ["Artifacts", "Dates", "Downloads", "FileWatching", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "Serialization", "TOML", "Tar", "UUIDs", "p7zip_jll"]
uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"
version = "1.9.2"

[[PrecompileTools]]
deps = ["Preferences"]
git-tree-sha1 = "03b4c25b43cb84cee5c90aa9b5ea0a78fd848d2f"
uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a"
version = "1.2.0"

[[Preferences]]
deps = ["TOML"]
git-tree-sha1 = "00805cd429dcb4870060ff49ef443486c262e38e"
uuid = "21216c6a-2e73-6563-6e65-726566657250"
version = "1.4.1"

[[Printf]]
deps = ["Unicode"]
Expand All @@ -144,49 +178,68 @@ deps = ["InteractiveUtils", "Markdown", "Sockets", "Unicode"]
uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb"

[[Random]]
deps = ["Serialization"]
deps = ["SHA", "Serialization"]
uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"

[[Richardson]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "e03ca566bec93f8a3aeb059c8ef102f268a38949"
git-tree-sha1 = "48f038bfd83344065434089c2a79417f38715c41"
uuid = "708f8203-808e-40c0-ba2d-98a6953ed40d"
version = "1.4.0"
version = "1.4.2"

[[SHA]]
uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"
version = "0.7.0"

[[Serialization]]
uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b"

[[SharedArrays]]
deps = ["Distributed", "Mmap", "Random", "Serialization"]
uuid = "1a1011a3-84de-559e-8e89-a11a2f7dc383"

[[Sockets]]
uuid = "6462fe0b-24de-5631-8697-dd941f90decc"

[[SparseArrays]]
deps = ["LinearAlgebra", "Random"]
deps = ["Libdl", "LinearAlgebra", "Random", "Serialization", "SuiteSparse_jll"]
uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"

[[StaticArrays]]
deps = ["LinearAlgebra", "Random", "Statistics"]
git-tree-sha1 = "3c76dde64d03699e074ac02eb2e8ba8254d428da"
deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"]
git-tree-sha1 = "2aded4182a14b19e9b62b063c0ab561809b5af2c"
uuid = "90137ffa-7385-5640-81b9-e52037218182"
version = "1.2.13"
version = "1.8.0"

[StaticArrays.extensions]
StaticArraysChainRulesCoreExt = "ChainRulesCore"
StaticArraysStatisticsExt = "Statistics"

[StaticArrays.weakdeps]
ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"

[[Statistics]]
deps = ["LinearAlgebra", "SparseArrays"]
uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
[[StaticArraysCore]]
git-tree-sha1 = "36b3d696ce6366023a0ea192b4cd442268995a0d"
uuid = "1e83bf80-4336-4d27-bf5d-d5a4f845583c"
version = "1.4.2"

[[SuiteSparse_jll]]
deps = ["Artifacts", "Libdl", "Pkg", "libblastrampoline_jll"]
uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c"
version = "5.10.1+6"

[[Suppressor]]
deps = ["Logging"]
git-tree-sha1 = "6cd9e4a207964c07bf6395beff7a1e8f21d0f3b2"
uuid = "fd094767-a336-5f1f-9728-57cf17d0bbfb"
version = "0.2.6"

[[TOML]]
deps = ["Dates"]
uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76"
version = "1.0.3"

[[Tar]]
deps = ["ArgTools", "SHA"]
uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e"
version = "1.10.0"

[[Test]]
deps = ["InteractiveUtils", "Logging", "Random", "Serialization"]
Expand All @@ -202,11 +255,19 @@ uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5"
[[Zlib_jll]]
deps = ["Libdl"]
uuid = "83775a58-1f1d-513f-b197-d71354ab007a"
version = "1.2.13+0"

[[libblastrampoline_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "8e850b90-86db-534c-a0d3-1478176c7d93"
version = "5.8.0+0"

[[nghttp2_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d"
version = "1.48.0+0"

[[p7zip_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0"
version = "17.4.0+0"
4 changes: 2 additions & 2 deletions docs/src/index.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -64,7 +64,7 @@
The call will test the `frule` for function `f` at the point `x` in the domain.
Keep this in mind when testing discontinuous rules for functions like [ReLU](https://en.wikipedia.org/wiki/Rectifier_(neural_networks)), which should ideally be tested at both `x` being above and below zero.

```jldoctest ex

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doctest failure in src/index.md:67-73

```jldoctest ex
julia> using ChainRulesTestUtils;

julia> test_frule(two2three, 3.33, -7.77);
Test Summary:                            | Pass  Total  Time
test_frule: two2three on Float64,Float64 |    6      6  2.7s

```

Subexpression:

test_frule(two2three, 3.33, -7.77);

Evaluated output:

Test Summary:                            | Pass  Total
test_frule: two2three on Float64,Float64 |    6      6

Expected output:

Test Summary:                            | Pass  Total  Time
test_frule: two2three on Float64,Float64 |    6      6  2.7s


  diff = 
    Warning: Diff output requires color.
    Test Summary:                            | Pass  Total  Time
    Total
    test_frule: two2three on Float64,Float64 |    6      6  2.7s6
julia> using ChainRulesTestUtils;

julia> test_frule(two2three, 3.33, -7.77);
Expand All @@ -78,7 +78,7 @@
[`test_rrule`](@ref) takes in the function `f`, and primal inputs `x`.
The call will test the `rrule` for function `f` at the point `x`, and similarly to `frule` some rules should be tested at multiple points in the domain.

```jldoctest ex

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doctest failure in src/index.md:81-88

```jldoctest ex
julia> test_rrule(two2three, 3.33, -7.77);
test_rrule: two2three on Float64,Float64: Test Failed at /home/lior/.julia/dev/ChainRulesTestUtils/src/check_result.jl:24
  Expression: isapprox(actual, expected; kwargs...)
  Problem: cotangent for input 2, Float64
   Evaluated: isapprox(-4.032, -3.840000000001641; rtol = 1.0e-9, atol = 1.0e-9)
[...]
```

Subexpression:

test_rrule(two2three, 3.33, -7.77);

Evaluated output:

test_rrule: two2three on Float64,Float64: Test Failed at /home/runner/work/ChainRulesTestUtils.jl/ChainRulesTestUtils.jl/src/check_result.jl:24
  Expression: 
  Problem: cotangent for input 2, Float64
   Evaluated: 
Stacktrace:
  [1] record(ts::Test.DefaultTestSet, t::Union{Test.Error, Test.Fail})
    @ Test /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:809
  [2] do_test(result::Test.ExecutionResult, orig_expr::Any)
    @ Test /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:555
  [3] test_approx(actual::Union{Number, AbstractArray{var"#s46", N} where {var"#s46"<:Number, N}}, expected::Union{Number, AbstractArray{var"#s45", N} where {var"#s45"<:Number, N}}, msg::Any; kwargs::Any)
    @ ChainRulesTestUtils ~/work/ChainRulesTestUtils.jl/ChainRulesTestUtils.jl/src/check_result.jl:24
  [4] _test_cotangent(accum_cotangent::Any, ad_cotangent::Any, fd_cotangent::Any, msg::Any; check_inferred::Any, kwargs::Any)
    @ ChainRulesTestUtils ~/work/ChainRulesTestUtils.jl/ChainRulesTestUtils.jl/src/testers.jl:312
  [5] (::ChainRulesTestUtils.var"#65#70"{Bool, NamedTuple{(:rtol, :atol), Tuple{Float64, Float64}}})(::Any, ::Vararg{Any, N} where N)
    @ ChainRulesTestUtils ~/work/ChainRulesTestUtils.jl/ChainRulesTestUtils.jl/src/testers.jl:236
  [6] foreach(::Function, ::Tuple{ChainRulesCore.NoTangent, Float64, Float64}, ::Tuple{ChainRulesCore.NoTangent, Float64, Float64}, ::Vararg{Any, N} where N)
    @ Base ./abstractarray.jl:2142
  [7] macro expansion
    @ ~/work/ChainRulesTestUtils.jl/ChainRulesTestUtils.jl/src/testers.jl:235 [inlined]
  [8] macro expansion
    @ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1151 [inlined]
  [9] test_rrule(::ChainRulesCore.RuleConfig, ::Any, ::Any, ::Vararg{Any, N} where N; output_tangent::Any, check_thunked_output_tangent::Any, fdm::Any, rrule_f::Any, check_inferred::Bool, fkwargs::NamedTuple, rtol::Real, atol::Real, testset_name::Any, kwargs::Any)
    @ ChainRulesTestUtils ~/work/ChainRulesTestUtils.jl/ChainRulesTestUtils.jl/src/testers.jl:205
 [10] test_rrule
    @ ~/work/ChainRulesTestUtils.jl/ChainRulesTestUtils.jl/src/testers.jl:197 [inlined]
 [11] #test_rrule#62
    @ ~/work/ChainRulesTestUtils.jl/ChainRulesTestUtils.jl/src/testers.jl:178 [inlined]
 [12] test_rrule(::Any, ::Any, ::Any)
    @ ChainRulesTestUtils ~/work/ChainRulesTestUtils.jl/ChainRulesTestUtils.jl/src/testers.jl:178
 [13] top-level scope
    @ none:1
 [14] eval
    @ ./boot.jl:360 [inlined]
 [15] #5
    @ ~/.julia/packages/Documenter/bYYzK/src/DocTests.jl:245 [inlined]
 [16] (::IOCapture.var"#3#5"{DataType, Documenter.DocTests.var"#5#6"{Module}, Task, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
    @ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:119
 [17] with_logstate(f::Function, logstate::Any)
    @ Base.CoreLogging ./logging.jl:491
 [18] with_logger
    @ ./logging.jl:603 [inlined]
 [19] capture(f::Documenter.DocTests.var"#5#6"{Module}; rethrow::Type, color::Bool)
    @ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:116
 [20] eval_repl(block::Documenter.DocTests.MutableMD2CodeBlock, sandbox::Module, meta::Dict{Symbol, Any}, doc::Documenter.Documents.Document, page::String)
    @ Documenter.DocTests ~/.julia/packages/Documenter/bYYzK/src/DocTests.jl:244
 [21] doctest(ctx::Documenter.DocTests.DocTestContext, block_immutable::Documenter.Utilities.Markdown2.CodeBlock)
    @ Documenter.DocTests ~/.julia/packages/Documenter/bYYzK/src/Do
julia> test_rrule(two2three, 3.33, -7.77);
test_rrule: two2three on Float64,Float64: Test Failed at /home/lior/.julia/dev/ChainRulesTestUtils/src/check_result.jl:24
Expression: isapprox(actual, expected; kwargs...)
Expand Down Expand Up @@ -111,15 +111,15 @@

`test_scalar` function is provided to test both the `frule` and the `rrule` with a single
call.
```jldoctest ex

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doctest failure in src/index.md:114-123

```jldoctest ex
julia> test_scalar(relu, 0.5);
Test Summary:            | Pass  Total  Time
test_scalar: relu at 0.5 |   11     11  0.5s


julia> test_scalar(relu, -0.5);
Test Summary:             | Pass  Total  Time
test_scalar: relu at -0.5 |   11     11  0.0s

```

Subexpression:

test_scalar(relu, 0.5);

Evaluated output:

Test Summary:            | Pass  Total
test_scalar: relu at 0.5 |   11     11

Expected output:

Test Summary:            | Pass  Total  Time
test_scalar: relu at 0.5 |   11     11  0.5s


  diff = 
    Warning: Diff output requires color.
    Test Summary:            | Pass  Total  Time
    Total
    test_scalar: relu at 0.5 |   11     11  0.5s11

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doctest failure in src/index.md:114-123

```jldoctest ex
julia> test_scalar(relu, 0.5);
Test Summary:            | Pass  Total  Time
test_scalar: relu at 0.5 |   11     11  0.5s


julia> test_scalar(relu, -0.5);
Test Summary:             | Pass  Total  Time
test_scalar: relu at -0.5 |   11     11  0.0s

```

Subexpression:

test_scalar(relu, -0.5);

Evaluated output:

Test Summary:             | Pass  Total
test_scalar: relu at -0.5 |   11     11

Expected output:

Test Summary:             | Pass  Total  Time
test_scalar: relu at -0.5 |   11     11  0.0s


  diff = 
    Warning: Diff output requires color.
    Test Summary:             | Pass  Total  Time
    Total
    test_scalar: relu at -0.5 |   11     11  0.0s11
julia> test_scalar(relu, 0.5);
Test Summary: | Pass Total Time
test_scalar: relu at 0.5 | 12 12 1.2s
test_scalar: relu at 0.5 | 11 11 0.5s


julia> test_scalar(relu, -0.5);
Test Summary: | Pass Total Time
test_scalar: relu at -0.5 | 12 12 0.0s
test_scalar: relu at -0.5 | 11 11 0.0s

```

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